RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 POP1Q99575 1024 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 CD207Q9UJ71 328 aa13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
NSMCE1-209ENST00000565384 NFASCO94856 1347 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 ITGB1P05556 798 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 SCG2P13521 617 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 DNAJB1P25685 340 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 NDUFV1P49821 464 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 STAT5BP51692 787 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 NAALADL2Q58DX5 795 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 PLPPR4Q7Z2D5 763 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 ADGRD2Q7Z7M1 963 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 CYP2W1Q8TAV3 490 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 CELF4Q9BZC1 486 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 MUTYHQ9UIF7 546 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 KIAA1671Q9BY89 1806 aa13.24□□□□□ -0.29
NSMCE1-209ENST00000565384 MYO7AQ13402 2215 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 KDM3AQ9Y4C1 1321 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 STXBP3O00186 592 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 ARP10275 920 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 GATMP50440 423 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 NAPAP54920 295 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 ADAM15Q13444 863 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 PPP1R18Q6NYC8 613 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 MTHFD1LQ6UB35 978 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 POF1BQ8WVV4 589 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 ANO3Q9BYT9 981 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 TMX1Q9H3N1 280 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 LRFN2Q9ULH4 789 aa13.23□□□□□ -0.29
NSMCE1-209ENST00000565384 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 KRT76Q01546 638 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 NFX1Q12986 1120 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 TMEM266Q2M3C6 531 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 CEP55Q53EZ4 464 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 HFE2Q6ZVN8 426 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 RNF135Q8IUD6 432 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 NME8Q8N427 588 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 MSLNLQ96KJ4 702 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-209ENST00000565384 IGKV6D-21A0A0A0MT36 114 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 ATG7O95352 703 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 EYA4O95677 639 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 SLC26A2P50443 739 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 ADCY7P51828 1080 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 HERC4Q5GLZ8 1057 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 ERVK-5Q9HDB9 667 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 TMEM260Q9NX78 707 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 CLEC1BQ9P126 229 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 GINS2Q9Y248 185 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.29
NSMCE1-209ENST00000565384 SMCO2A6NFE2 343 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 MEIS1O00470 390 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 BACH1O14867 736 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 HBP1O60381 514 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 MGEA5O60502 916 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 CCNE2O96020 404 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 KLRC1P26715 233 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 SREBF1P36956 1147 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 NRIP1P48552 1158 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 NHLH1Q02575 133 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 FUT2Q10981 343 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 COASYQ13057 564 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 AP3B2Q13367 1082 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 RTN1Q16799 776 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 RBM23Q86U06 439 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 SMRP1Q8NCR6 262 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms