RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 NFASCO94856 1347 aa16.12■□□□□ 0.17
CDR2-204ENST00000564542 TRIOO75962 3097 aa16.12■□□□□ 0.17
CDR2-204ENST00000564542 LOXHD1Q8IVV2 1947 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 LINC01565O15544 149 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 CSPG5O95196 566 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 STAG3L1P0CL83 205 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 SCG2P13521 617 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 ACTR2P61160 394 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 TMEM62Q0P6H9 643 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 PLCB4Q15147 1175 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 RTN4RL1Q86UN2 441 aaPredicted RBP16.11■□□□□ 0.17
CDR2-204ENST00000564542 MICU3Q86XE3 530 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 CELF4Q9BZC1 486 aaKnown RBP16.11■□□□□ 0.17
CDR2-204ENST00000564542 KCNH6Q9H252 994 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 IGFLR1Q9H665 355 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 KDM3AQ9Y4C1 1321 aa16.11■□□□□ 0.17
CDR2-204ENST00000564542 SMIM35A0A1B0GVV1 85 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 ITGB1P05556 798 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 DNAJB1P25685 340 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 NDUFV1P49821 464 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 SLC26A2P50443 739 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 STAT5BP51692 787 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 ADAM15Q13444 863 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 CREB3L3Q68CJ9 461 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 WWC2Q6AWC2 1192 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 FAM43BQ6ZT52 329 aaPredicted RBP16.1■□□□□ 0.17
CDR2-204ENST00000564542 NME8Q8N427 588 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 CYP2W1Q8TAV3 490 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 TRAPPC12Q8WVT3 735 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 RIC8AQ9NPQ8 531 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 WDFY4Q6ZS81 3184 aa16.1■□□□□ 0.17
CDR2-204ENST00000564542 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 NAPAP54920 295 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 KRT76Q01546 638 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 NECTIN1Q15223 517 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 HERC4Q5GLZ8 1057 aaPredicted RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 TYW1BQ6NUM6 668 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 KLHL23Q8NBE8 558 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 MSLNLQ96KJ4 702 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 AGO4Q9HCK5 861 aaKnown RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 RBM28Q9NW13 759 aaKnown RBP16.09■□□□□ 0.17
CDR2-204ENST00000564542 MUTYHQ9UIF7 546 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 PLXNA4Q9HCM2 1894 aa16.09■□□□□ 0.17
CDR2-204ENST00000564542 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 STXBP3O00186 592 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 ATG7O95352 703 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 EYA4O95677 639 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 ARP10275 920 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.16
CDR2-204ENST00000564542 APOA5Q6Q788 366 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 HFE2Q6ZVN8 426 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 RNF135Q8IUD6 432 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 EFHBQ8N7U6 833 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
CDR2-204ENST00000564542 POF1BQ8WVV4 589 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 ANO3Q9BYT9 981 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 LRFN2Q9ULH4 789 aa16.08■□□□□ 0.16
CDR2-204ENST00000564542 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 MEIS1O00470 390 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 SREBF1P36956 1147 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 GATMP50440 423 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 ADCY7P51828 1080 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 COASYQ13057 564 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 ALYREFQ86V81 257 aaKnown RBP16.07■□□□□ 0.16
CDR2-204ENST00000564542 SMRP1Q8NCR6 262 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 COL1A2P08123 1366 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 FNDC1Q4ZHG4 1894 aaPredicted RBP16.07■□□□□ 0.16
CDR2-204ENST00000564542 ZNF318Q5VUA4 2279 aa16.07■□□□□ 0.16
CDR2-204ENST00000564542 HBP1O60381 514 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 CCNE2O96020 404 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 NRIP1P48552 1158 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 NHLH1Q02575 133 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 FUT2Q10981 343 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 MFSD14AQ96MC6 490 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 FBXL18Q96ME1 805 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 ERVK-5Q9HDB9 667 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 C1orf112Q9NSG2 853 aa16.06■□□□□ 0.16
CDR2-204ENST00000564542 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms