RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 BANK1Q8NDB2 785 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 BRF1Q92994 677 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 ZNF689Q96CS4 500 aaPredicted RBP27.19■■□□□ 1.94
NME3-206ENST00000564252 JAKMIP1Q96N16 626 aaKnown RBP27.19■■□□□ 1.94
NME3-206ENST00000564252 TRPV2Q9Y5S1 764 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 LOXHD1Q8IVV2 1947 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 SMIM35A0A1B0GVV1 85 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 ESYT2A0FGR8 921 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 C5orf67F2Z3F1 127 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 DDX39AO00148 427 aaKnown RBP27.18■■□□□ 1.94
NME3-206ENST00000564252 DHX15O43143 795 aaKnown RBP27.18■■□□□ 1.94
NME3-206ENST00000564252 CYP3A4P08684 503 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 HSPA4P34932 840 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 CTNNB1P35222 781 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 PLA2G4DQ86XP0 818 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.18■■□□□ 1.94
NME3-206ENST00000564252 ZMYND12Q9H0C1 365 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 ATG2AQ2TAZ0 1938 aa27.18■■□□□ 1.94
NME3-206ENST00000564252 PKN1Q16512 942 aa27.17■■□□□ 1.94
NME3-206ENST00000564252 MTHFD1LQ6UB35 978 aa27.17■■□□□ 1.94
NME3-206ENST00000564252 RTN4RL1Q86UN2 441 aaPredicted RBP27.17■■□□□ 1.94
NME3-206ENST00000564252 CCDC60Q8IWA6 550 aaPredicted RBP27.17■■□□□ 1.94
NME3-206ENST00000564252 FBXL16Q8N461 479 aa27.17■■□□□ 1.94
NME3-206ENST00000564252 CLP1Q92989 425 aaKnown RBP27.17■■□□□ 1.94
NME3-206ENST00000564252 IGSF9BQ9UPX0 1349 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 M0QZ92 97 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 RB1P06400 928 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 BMPR1AP36894 532 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 TCEAL5Q5H9L2 206 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 BLOC1S2Q6QNY1 142 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 CRIPAKQ8N1N5 446 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 C1QTNF1Q9BXJ1 281 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 FTHL17Q9BXU8 183 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 CELF4Q9BZC1 486 aaKnown RBP27.16■■□□□ 1.94
NME3-206ENST00000564252 PADI3Q9ULW8 664 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 RWDD3Q9Y3V2 267 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 KDM3AQ9Y4C1 1321 aa27.16■■□□□ 1.94
NME3-206ENST00000564252 IPO5O00410 1097 aaKnown RBP27.15■■□□□ 1.94
NME3-206ENST00000564252 BACH1O14867 736 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 PRPF3O43395 683 aaKnown RBP27.15■■□□□ 1.94
NME3-206ENST00000564252 HBP1O60381 514 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 DGKIO75912 1065 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 BTG3Q14201 252 aaPredicted RBP27.15■■□□□ 1.94
NME3-206ENST00000564252 COL19A1Q14993 1142 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 FAM160B1Q5W0V3 765 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 NME8Q8N427 588 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 NEK9Q8TD19 979 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 ATP8B4Q8TF62 1192 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 AGXT2Q9BYV1 514 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 NSUN3Q9H649 340 aaKnown RBP27.15■■□□□ 1.94
NME3-206ENST00000564252 C6orf50Q9HD87 102 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 RAPGEFL1Q9UHV5 662 aa27.15■■□□□ 1.94
NME3-206ENST00000564252 RPS6KB1P23443 525 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 MCTP2Q6DN12 878 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 REXO1Q8N1G1 1221 aaKnown RBP27.14■■□□□ 1.94
NME3-206ENST00000564252 CCDC12Q8WUD4 166 aaPredicted RBP27.14■■□□□ 1.94
NME3-206ENST00000564252 UIMC1Q96RL1 719 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 C11orf84Q9BUA3 381 aaPredicted RBP27.14■■□□□ 1.94
NME3-206ENST00000564252 EPHX3Q9H6B9 360 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 CD320Q9NPF0 282 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 ZNF302Q9NR11 478 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 MYO7AQ13402 2215 aa27.14■■□□□ 1.94
NME3-206ENST00000564252 COL1A2P08123 1366 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 GRM6O15303 877 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 KLRC1P26715 233 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 KRT76Q01546 638 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 PAK2Q13177 524 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 NTRK3Q16288 839 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 KHSRPQ92945 711 aaKnown RBP eCLIP27.13■■□□□ 1.93
NME3-206ENST00000564252 PHKBQ93100 1093 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 PABPC5Q96DU9 382 aaKnown RBP27.13■■□□□ 1.93
NME3-206ENST00000564252 LMAN2LQ9H0V9 348 aa27.13■■□□□ 1.93
NME3-206ENST00000564252 ZBTB42B2RXF5 422 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 ATP4AP20648 1035 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 SETQ01105 290 aaPredicted RBP27.12■■□□□ 1.93
NME3-206ENST00000564252 PTCRAQ6ISU1 281 aaPredicted RBP27.12■■□□□ 1.93
NME3-206ENST00000564252 SWSAP1Q6NVH7 229 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 MIS18BP1Q6P0N0 1132 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 PDXDC2PQ6P474 469 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 NPAS4Q8IUM7 802 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 ZNF577Q9BSK1 485 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 TMX1Q9H3N1 280 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 TBC1D22BQ9NU19 505 aa27.12■■□□□ 1.93
NME3-206ENST00000564252 IL9P15248 144 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 GNA11P29992 359 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 ZNF484Q5JVG2 852 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 FAM178BQ8IXR5 827 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 CMTR2Q8IYT2 770 aaKnown RBP27.11■■□□□ 1.93
NME3-206ENST00000564252 KIAA0319LQ8IZA0 1049 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 KIAA1671Q9BY89 1806 aa27.11■■□□□ 1.93
NME3-206ENST00000564252 GRXCR2A6NFK2 248 aa27.1■■□□□ 1.93
NME3-206ENST00000564252 H3BQ06 376 aaPredicted RBP27.1■■□□□ 1.93
NME3-206ENST00000564252 TMEM266Q2M3C6 531 aa27.1■■□□□ 1.93
NME3-206ENST00000564252 ZNF746Q6NUN9 644 aaPredicted RBP27.1■■□□□ 1.93
NME3-206ENST00000564252 RASGRP4Q8TDF6 673 aa27.1■■□□□ 1.93
NME3-206ENST00000564252 PLVAPQ9BX97 442 aa27.1■■□□□ 1.93
NME3-206ENST00000564252 RNF26Q9BY78 433 aaPredicted RBP27.1■■□□□ 1.93
NME3-206ENST00000564252 MAFBQ9Y5Q3 323 aaPredicted RBP27.1■■□□□ 1.93
NME3-206ENST00000564252 MRPL42Q9Y6G3 142 aaKnown RBP27.1■■□□□ 1.93
NME3-206ENST00000564252 EVPLQ92817 2033 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms