RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 NHEJ1Q9H9Q4 299 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 TMBIM4Q9HC24 238 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ETAA1Q9NY74 926 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 A0A1W2PQJ5 194 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 hCG_1642624A0A1W2PR95 340 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 PES1O00541 588 aaKnown RBP12.12□□□□□ -0.47
TCF4-222ENST00000564228 PARP1P09874 1014 aaKnown RBP12.12□□□□□ -0.47
TCF4-222ENST00000564228 GCKP35557 465 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 HSPA9P38646 679 aaKnown RBP12.12□□□□□ -0.47
TCF4-222ENST00000564228 CAP2P40123 477 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 BIRC3Q13489 604 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 DLK2Q6UY11 383 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 TMTC3Q6ZXV5 915 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
TCF4-222ENST00000564228 CUL5Q93034 780 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
TCF4-222ENST00000564228 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
TCF4-222ENST00000564228 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 DEXIO95424 95 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 RWDD2BP57060 319 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 SLC7A5Q01650 507 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 PRKG1Q13976 671 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 E2F5Q15329 346 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 SPA17Q15506 151 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 DCAF15Q66K64 600 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 SYMPKQ92797 1274 aaKnown RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 SEC16BQ96JE7 1060 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 TAF1DQ9H5J8 278 aaPredicted RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 SLC12A6Q9UHW9 1150 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 POTECB2RU33 542 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 LCA5LO95447 670 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 SSR1P43307 286 aaKnown RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 KRT26Q7Z3Y9 468 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 CCT6BQ92526 530 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 C15orf41Q9Y2V0 281 aa12.11□□□□□ -0.47
TCF4-222ENST00000564228 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
TCF4-222ENST00000564228 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 MACROD2A1Z1Q3 448 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 ASNSP08243 561 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
TCF4-222ENST00000564228 ECE1P42892 770 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 BYSLQ13895 437 aaKnown RBP12.1□□□□□ -0.47
TCF4-222ENST00000564228 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
TCF4-222ENST00000564228 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
TCF4-222ENST00000564228 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 HVCN1Q96D96 273 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 SAAL1Q96ER3 474 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
TCF4-222ENST00000564228 ZNF341Q9BYN7 854 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
TCF4-222ENST00000564228 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 PJA2O43164 708 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 BUB1BO60566 1050 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 GNAQP50148 359 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 FUT2Q10981 343 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CCDC26Q8TAB7 109 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 MKL1Q969V6 931 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 SPAG5Q96R06 1193 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 PPANQ9NQ55 473 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 NFU1Q9UMS0 254 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 KCNJ14Q9UNX9 436 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms