RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 SPECC1Q5M775 1068 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 IQSEC1Q6DN90 963 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 MFSD5Q6N075 450 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 ZNF365Q70YC5 407 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 PDILTQ8N807 584 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 USP38Q8NB14 1042 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 SMARCE1Q969G3 411 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 DHX58Q96C10 678 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 SCLYQ96I15 445 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 EPSTI1Q96J88 318 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 BPIFA3Q9BQP9 254 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 NOC4LQ9BVI4 516 aaKnown RBP10.92□□□□□ -0.66
UBFD1-203ENST00000564106 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
UBFD1-203ENST00000564106 TMEM60Q9H2L4 133 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 BCAS3Q9H6U6 928 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 TELO2Q9Y4R8 837 aa10.92□□□□□ -0.66
UBFD1-203ENST00000564106 TRIP12Q14669 1992 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-203ENST00000564106 GOLGA6L19H0YKK7 550 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 RGS20O76081 388 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 MYL3P08590 195 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 ZNF76P36508 570 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 NLRP12P59046 1061 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 SMAD3P84022 425 aaKnown RBP10.91□□□□□ -0.66
UBFD1-203ENST00000564106 AMPD3Q01432 767 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 GRIN2CQ14957 1233 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 LY6KQ17RY6 165 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 TCTN1Q2MV58 587 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-203ENST00000564106 NT5DC1Q5TFE4 455 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 RRAGBQ5VZM2 374 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 KRT79Q5XKE5 535 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 CABP7Q86V35 215 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 OR6J1Q8NGC5 347 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 ERMNQ8TAM6 284 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 CDK5RAP3Q96JB5 506 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 GSDMAQ96QA5 445 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 LRRC27Q9C0I9 530 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 NT5C3AQ9H0P0 336 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 AP5M1Q9H0R1 490 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-203ENST00000564106 RMND1Q9NWS8 449 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 STK17AQ9UEE5 414 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 LRWD1Q9UFC0 647 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 PCDHA12Q9UN75 941 aa10.91□□□□□ -0.66
UBFD1-203ENST00000564106 MYO9BQ13459 2157 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 BECN2A8MW95 431 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 SLC37A4O43826 429 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 SORBS3O60504 671 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
UBFD1-203ENST00000564106 DNAJB2P25686 324 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-203ENST00000564106 TECP42680 631 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 TXKP42681 527 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 ARHGAP1Q07960 439 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 HIC1Q14526 733 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 E2F4Q16254 413 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 IL17AQ16552 155 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 NBPF20Q3BBV1 942 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 ZNF697Q5TEC3 545 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 HAUS3Q68CZ6 603 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 KAT2BQ92831 832 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 CCDC47Q96A33 483 aaKnown RBP10.9□□□□□ -0.66
UBFD1-203ENST00000564106 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 SPC25Q9HBM1 224 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 YBX2Q9Y2T7 364 aaKnown RBP10.9□□□□□ -0.66
UBFD1-203ENST00000564106 Q9Y3F1 56 aa10.9□□□□□ -0.66
UBFD1-203ENST00000564106 A6NJR5 290 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 MYOGP15173 224 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 PDE4DQ08499 809 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 PNOCQ13519 176 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 GPNMBQ14956 572 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 SEPT14Q6ZU15 432 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 FCHSD1Q86WN1 690 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 SPATA20Q8TB22 786 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 DHX38Q92620 1227 aaKnown RBP10.89□□□□□ -0.67
UBFD1-203ENST00000564106 WNT8BQ93098 351 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 HIPK3Q9H422 1215 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 ADD3Q9UEY8 706 aaKnown RBP10.89□□□□□ -0.67
UBFD1-203ENST00000564106 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 TTC28Q96AY4 2481 aa10.89□□□□□ -0.67
UBFD1-203ENST00000564106 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms