RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MORN1Q5T089 497 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 FAM160B1Q5W0V3 765 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 FOXR2Q6PJQ5 311 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 C1orf186Q6ZWK4 172 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 OTUD6AQ7L8S5 288 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-205ENST00000562310 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
COMMD4-205ENST00000562310 MAML3Q96JK9 1138 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-205ENST00000562310 GABBR1Q9UBS5 961 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 SEL1LQ9UBV2 794 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
COMMD4-205ENST00000562310 NFE2L3Q9Y4A8 694 aa15.86■□□□□ 0.13
COMMD4-205ENST00000562310 RBM47A0AV96 593 aaKnown RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 BACH1O14867 736 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 FAM13AO94988 1023 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 HOXC6P09630 235 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 RARRES1P49788 294 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 STK4Q13043 487 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 UGCGQ16739 394 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 TPD52L1Q16890 204 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 HERC4Q5GLZ8 1057 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 CELF3Q5SZQ8 465 aaKnown RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 COL13A1Q5TAT6 717 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 EEPD1Q7L9B9 569 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 TRMT44Q8IYL2 757 aaKnown RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 KIAA0895Q8NCT3 520 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 NOC3LQ8WTT2 800 aaKnown RBP15.85■□□□□ 0.13
COMMD4-205ENST00000562310 CAPNS2Q96L46 248 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 MLXIPQ9HAP2 919 aa15.85■□□□□ 0.13
COMMD4-205ENST00000562310 THSD7BQ9C0I4 1608 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 CCNE1P24864 410 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 CDC25BP30305 580 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 RGS2P41220 211 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 SP4Q02446 784 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 XKR3Q5GH77 459 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 SWSAP1Q6NVH7 229 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 PADI6Q6TGC4 694 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 CCDC60Q8IWA6 550 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-205ENST00000562310 MYOCDQ8IZQ8 938 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 SEPT1Q8WYJ6 367 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 P2RX5Q93086 422 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 MRFAP1L1Q96HT8 127 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 TINF2Q9BSI4 451 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 SLC39A2Q9NP94 309 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 ZNF302Q9NR11 478 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 OLFML3Q9NRN5 406 aa15.84■□□□□ 0.13
COMMD4-205ENST00000562310 NPHP3-ACAD11A0A0J9YXS1 232 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 NOP56O00567 594 aaKnown RBP15.83■□□□□ 0.12
COMMD4-205ENST00000562310 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ARIH2O95376 493 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 TXNP10599 105 aaKnown RBP15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ZNF18P17022 549 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ZNF75DP51815 510 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ZNF131P52739 623 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 PRKCEQ02156 737 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 SPAG1Q07617 926 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 GRM1Q13255 1194 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 LY6KQ17RY6 165 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 XKR9Q5GH70 373 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 STXBP4Q6ZWJ1 553 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 SFR1Q86XK3 245 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 DHX37Q8IY37 1157 aaKnown RBP15.83■□□□□ 0.12
COMMD4-205ENST00000562310 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 FAM167AQ96KS9 214 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 APBA2Q99767 749 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 HSD3B7Q9H2F3 369 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ABHD16BQ9H3Z7 469 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 ZHX3Q9H4I2 956 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 FANCLQ9NW38 375 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 PPME1Q9Y570 386 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 MAFBQ9Y5Q3 323 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-205ENST00000562310 CASP8AP2Q9UKL3 1982 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 UBE4BO95155 1302 aa15.83■□□□□ 0.12
COMMD4-205ENST00000562310 GSTTP1A0A1W2PQM5 241 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 TNPO2O14787 897 aaKnown RBP15.82■□□□□ 0.12
COMMD4-205ENST00000562310 ZBTB39O15060 712 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 NKRFO15226 690 aaKnown RBP eCLIP15.82■□□□□ 0.12
COMMD4-205ENST00000562310 AP5Z1O43299 807 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 ZNF862O60290 1169 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 GH1P01241 217 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 OATP04181 439 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 TPM3P06753 285 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 FCGRTP55899 365 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 STX17P56962 302 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 LRRC63Q05C16 580 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 RAD51AP2Q09MP3 1159 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 CDKAL1Q5VV42 579 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 OLFML2BQ68BL8 750 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 TAPT1Q6NXT6 567 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 ANKRD20A12PQ8NF67 263 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms