RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 B4DLN1 442 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 NCAM2O15394 837 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 SNW1Q13573 536 aaKnown RBP11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 LY6KQ17RY6 165 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 GPR149Q86SP6 731 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 KLK13Q9UKR3 277 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 CFAP46Q8IYW2 2715 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 SDK1Q7Z5N4 2213 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 MAGEB6P1A0A0J9YX57 407 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 IBSPP21815 317 aaPredicted RBP11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 ZAP70P43403 619 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 STAT2P52630 851 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 KCNC4Q03721 635 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 PRKCQQ04759 706 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 MLF2Q15773 248 aaPredicted RBP11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 STAMQ92783 540 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 LTB4R2Q9NPC1 389 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 CCPG1Q9ULG6 757 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 SRPK3Q9UPE1 567 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 PCDHB13Q9Y5F0 798 aa11.24□□□□□ -0.61
AC010542.3-202ENST00000561728 C2orf71A6NGG8 1288 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 CEACAM1P13688 526 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 LAG3P18627 525 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 CALML3P27482 149 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 KRT17Q04695 432 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 BMS1Q14692 1282 aaKnown RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 GLG1Q92896 1179 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 MYADMQ96S97 322 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 RIOK1Q9BRS2 568 aaKnown RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 ARRDC1-AS1Q9H2J1 176 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 DCP1AQ9NPI6 582 aaPredicted RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 NYAP2Q9P242 653 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.23□□□□□ -0.61
AC010542.3-202ENST00000561728 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 BMP3P12645 472 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 TDGF1P13385 188 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 SCG2P13521 617 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 EPCAMP16422 314 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 EDNRBP24530 442 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 CNR2P34972 360 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 MTAPQ13126 283 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 LPIN1Q14693 890 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 CEP68Q76N32 757 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 FAM160B2Q86V87 743 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 PPTC7Q8NI37 304 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 CHURC1Q8WUH1 139 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 LINC01599Q8WXQ3 324 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 CCDC8Q9H0W5 538 aaPredicted RBP11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
AC010542.3-202ENST00000561728 APC2O95996 2303 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 NRCAMQ92823 1304 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 AXIN1O15169 862 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 LILRB3O75022 631 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 CHRNA1P02708 482 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 UBTFL1P0CB47 393 aaPredicted RBP11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 SMIM10L2AP0DMW4 78 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 SMIM10L2BP0DMW5 78 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 GNAT1P11488 350 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 PSEN1P49768 467 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 TMED8Q6PL24 325 aaPredicted RBP11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 RSPO2Q6UXX9 243 aaPredicted RBP11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 C16orf86Q6ZW13 317 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
AC010542.3-202ENST00000561728 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
AC010542.3-202ENST00000561728 HRO43593 1189 aa11.2□□□□□ -0.62
AC010542.3-202ENST00000561728 CAPNS1P04632 268 aa11.2□□□□□ -0.62
AC010542.3-202ENST00000561728 CD72P21854 359 aa11.2□□□□□ -0.62
AC010542.3-202ENST00000561728 PPM1AP35813 382 aa11.2□□□□□ -0.62
AC010542.3-202ENST00000561728 SNAP25P60880 206 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms