RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 IER5Q5VY09 327 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 BLOC1S2Q6QNY1 142 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 PLPPR4Q7Z2D5 763 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 CCDC60Q8IWA6 550 aaPredicted RBP30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 RASGRP4Q8TDF6 673 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 KHSRPQ92945 711 aaKnown RBP eCLIP30.79■■■□□ 2.522e-6■■■□□ 16
SNRPA1-215ENST00000561187 PPP1R16BQ96T49 567 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 ATG2AQ2TAZ0 1938 aa30.79■■■□□ 2.52
SNRPA1-215ENST00000561187 TTC3P53804 2025 aa30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 IL9P15248 144 aa30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 BTG3Q14201 252 aaPredicted RBP30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 GLT8D2Q9H1C3 349 aa30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 RC3H2Q9HBD1 1191 aaKnown RBP30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 PCDHA2Q9Y5H9 948 aa30.78■■■□□ 2.52
SNRPA1-215ENST00000561187 LINC00271P0C7V0 271 aa30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 RCAN1P53805 252 aa30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 PAK2Q13177 524 aa30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 PAN2Q504Q3 1202 aaKnown RBP30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 MTHFD1LQ6UB35 978 aa30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 CD320Q9NPF0 282 aa30.77■■■□□ 2.52
SNRPA1-215ENST00000561187 GRM6O15303 877 aa30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 LEXMQ3ZCV2 418 aa30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 FAM160B1Q5W0V3 765 aa30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 NSUN3Q9H649 340 aaKnown RBP30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 ZNF302Q9NR11 478 aa30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 PADI3Q9ULW8 664 aa30.76■■■□□ 2.51
SNRPA1-215ENST00000561187 IGLV3-22A0A075B6J6 115 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 CCDC196A0A1B0GTZ2 297 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 ATG7O95352 703 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 HSPA4P34932 840 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 GATMP50440 423 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 PKN1Q16512 942 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 PTCRAQ6ISU1 281 aaPredicted RBP30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 PDXDC2PQ6P474 469 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 ABHD15Q6UXT9 468 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 RTN4RL1Q86UN2 441 aaPredicted RBP30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 REXO1Q8N1G1 1221 aaKnown RBP30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 TNPO1Q92973 898 aaKnown RBP30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 ZNF577Q9BSK1 485 aa30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 CELF4Q9BZC1 486 aaKnown RBP30.75■■■□□ 2.51
SNRPA1-215ENST00000561187 IGSF9BQ9UPX0 1349 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 IPO5O00410 1097 aaKnown RBP30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 KLRC1P26715 233 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 BMPR1AP36894 532 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 KRT76Q01546 638 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 SWSAP1Q6NVH7 229 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 NIPA1Q7RTP0 329 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 CKAP2LQ8IYA6 745 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 C11orf84Q9BUA3 381 aaPredicted RBP30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 C6orf50Q9HD87 102 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 CLDND1Q9NY35 253 aa30.74■■■□□ 2.51
SNRPA1-215ENST00000561187 IGKV6D-21A0A0A0MT36 114 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 SMIM35A0A1B0GVV1 85 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 DHX15O43143 795 aaKnown RBP30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 DGKIO75912 1065 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 RPS6KB1P23443 525 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 NFX1Q12986 1120 aaKnown RBP30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 MIS18BP1Q6P0N0 1132 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 TEX2Q8IWB9 1127 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 ATP8B4Q8TF62 1192 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 KCNB2Q92953 911 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 ZNF689Q96CS4 500 aaPredicted RBP30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 CCDC136Q96JN2 1154 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 C1QTNF1Q9BXJ1 281 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 SLC26A6Q9BXS9 759 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 ZMYND12Q9H0C1 365 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 NCOA5Q9HCD5 579 aaKnown RBP30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 MRPL42Q9Y6G3 142 aaKnown RBP30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 KIAA1671Q9BY89 1806 aa30.73■■■□□ 2.51
SNRPA1-215ENST00000561187 FAM86C2PA6NEL3 165 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 HBP1O60381 514 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 RPLP2P05387 115 aaKnown RBP30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 CCT2P78371 535 aaKnown RBP30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 AKAP17AQ02040 695 aaKnown RBP30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 PRR16Q569H4 304 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 CCDC12Q8WUD4 166 aaPredicted RBP30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 CRYGNQ8WXF5 182 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 TMX1Q9H3N1 280 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 CDHR5Q9HBB8 845 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 ALG13Q9NP73 1137 aaKnown RBP30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 VPS54Q9P1Q0 977 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 TCEAL9Q9UHQ7 104 aa30.72■■■□□ 2.51
SNRPA1-215ENST00000561187 EVPLQ92817 2033 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 ESYT2A0FGR8 921 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 C5orf67F2Z3F1 127 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 SSTR3P32745 418 aaPredicted RBP30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 SLC26A2P50443 739 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 NPAS4Q8IUM7 802 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 FTHL17Q9BXU8 183 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 RWDD3Q9Y3V2 267 aa30.71■■■□□ 2.51
SNRPA1-215ENST00000561187 NID2Q14112 1375 aa30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 PRPF3O43395 683 aaKnown RBP30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 CYP3A4P08684 503 aa30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 ATP4AP20648 1035 aa30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 CLUL1Q15846 466 aa30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 TMEM40Q8WWA1 233 aa30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 CLP1Q92989 425 aaKnown RBP30.7■■■□□ 2.51
SNRPA1-215ENST00000561187 PABPC5Q96DU9 382 aaKnown RBP30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms