RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ANKRD18AQ8IVF6 992 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ARHGAP45Q92619 1136 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 GOLGA1Q92805 767 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 HSPBAP1Q96EW2 488 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC26A6Q9BXS9 759 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PEAK1Q9H792 1746 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 TRBV23-1A0A0A0MS06 115 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 A0A1B0GUA9 196 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 FANCGO15287 622 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 KINO60870 393 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 NEFHP12036 1026 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 INPP5BP32019 993 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 IL2P60568 153 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PIP4K2BP78356 416 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 MZT2BQ6NZ67 158 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 IQCA1Q86XH1 822 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 LRRC47Q8N1G4 583 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 KLHL23Q8NBE8 558 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 BICD2Q8TD16 824 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 OTUD7AQ8TE49 926 aaPredicted RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 XAGE2Q96GT9 111 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ZNF496Q96IT1 587 aaPredicted RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 MIR1-1HGQ9H1L0 117 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 CEP131Q9UPN4 1083 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 MTMR6Q9Y217 621 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ANKRD6Q9Y2G4 727 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 EBAG9O00559 213 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 NCAM2O15394 837 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 NCK2O43639 380 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 DNAJA2O60884 412 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 HMOX1P09601 288 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 GRNP28799 593 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PPP2R3AQ06190 1150 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 RBBP5Q15291 538 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 TDRD10Q5VZ19 366 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 MILR1Q7Z6M3 343 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ANKLE2Q86XL3 938 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 TAB3Q8N5C8 712 aaPredicted RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 THOC1Q96FV9 657 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 ZFRQ96KR1 1074 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PHACTR3Q96KR7 559 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 CLIC6Q96NY7 704 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 MPHOSPH8Q99549 860 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 NUDT16L1Q9BRJ7 211 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 UPF3BQ9BZI7 483 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 FAM204AQ9H8W3 233 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 RABGEF1Q9UJ41 708 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 SALL4Q9UJQ4 1053 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PIK3C2AO00443 1686 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 BRINP1O60477 761 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 RAD52P43351 418 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 RPS6KA3P51812 740 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 GJA9P57773 515 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 BPIFB3P59826 476 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 FAAH2Q6GMR7 532 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 ARMCX5Q6P1M9 558 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 DNAJB7Q7Z6W7 309 aaPredicted RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 NCAPG2Q86XI2 1143 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 SEPT12Q8IYM1 358 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 NAXEQ8NCW5 288 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC35G2Q8TBE7 412 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 GRIN3AQ8TCU5 1115 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 STON2Q8WXE9 905 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 RPGRQ92834 1020 aaKnown RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 TTC17Q96AE7 1141 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 THUMPD2Q9BTF0 503 aaKnown RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 GSX2Q9BZM3 304 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 VPS11Q9H270 941 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 BRD9Q9H8M2 597 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 GIMAP2Q9UG22 337 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 L1RE1Q9UN81 338 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 SMC3Q9UQE7 1217 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 MRFAP1Q9Y605 127 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 ATXN2Q99700 1313 aaKnown RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 EME2A4GXA9 379 aaPredicted RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 RFPL3O75679 317 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 FNTAP49354 379 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 TUBP50607 506 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 SCAND1P57086 179 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 KRT85P78386 507 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 FAAP100Q0VG06 881 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 KIAA0753Q2KHM9 967 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC5A9Q2M3M2 681 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 TGFBRAP1Q8WUH2 860 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 CHCHD6Q9BRQ6 235 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 GPN3Q9UHW5 284 aaPredicted RBP7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 RAB21Q9UL25 225 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 CORO2BQ9UQ03 480 aa7.44□□□□□ -1.22
TSPAN3-209ENST00000560715 LCHNA4D1U4 455 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 SHOX2O60902 331 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms