RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 CDC27P30260 824 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 SSTR3P32745 418 aaPredicted RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 SREBF1P36956 1147 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 FGD1P98174 961 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 TMEM62Q0P6H9 643 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 PUS10Q3MIT2 529 aaKnown RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 GJD3Q8N144 294 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 TRAPPC12Q8WVT3 735 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 CLP1Q92989 425 aaKnown RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 ZNF689Q96CS4 500 aaPredicted RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 PABPC5Q96DU9 382 aaKnown RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 LRFN3Q9BTN0 628 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 FTHL17Q9BXU8 183 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 RC3H2Q9HBD1 1191 aaKnown RBP12.19□□□□□ -0.46
CCDC33-207ENST00000559243 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
CCDC33-207ENST00000559243 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
CCDC33-207ENST00000559243 BACH1O14867 736 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 GRM6O15303 877 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 CDC45O75419 566 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 DGKIO75912 1065 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 LINC00271P0C7V0 271 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 SLC26A2P50443 739 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 RCAN1P53805 252 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 PAK2Q13177 524 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 JAKMIP3Q5VZ66 844 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 FAM160B1Q5W0V3 765 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 NIPA1Q7RTP0 329 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 RTN4RL1Q86UN2 441 aaPredicted RBP12.18□□□□□ -0.46
CCDC33-207ENST00000559243 PLA2G4DQ86XP0 818 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 NME8Q8N427 588 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 LINC01599Q8WXQ3 324 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 CELF4Q9BZC1 486 aaKnown RBP12.18□□□□□ -0.46
CCDC33-207ENST00000559243 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
CCDC33-207ENST00000559243 CLDND1Q9NY35 253 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
CCDC33-207ENST00000559243 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 KDM3AQ9Y4C1 1321 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 EVPLQ92817 2033 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 IGKV6D-21A0A0A0MT36 114 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 CCDC196A0A1B0GTZ2 297 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 NCK2O43639 380 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 HBP1O60381 514 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 GPR37L1O60883 481 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 CCNE2O96020 404 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 STAG3L1P0CL83 205 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 KLRC1P26715 233 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
CCDC33-207ENST00000559243 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC33-207ENST00000559243 KRT76Q01546 638 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 COL19A1Q14993 1142 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 PFKFB3Q16875 520 aaPredicted RBP12.17□□□□□ -0.46
CCDC33-207ENST00000559243 MIS18BP1Q6P0N0 1132 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 FAM50BQ9Y247 325 aa12.17□□□□□ -0.46
CCDC33-207ENST00000559243 ATG2AQ2TAZ0 1938 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 FAM86B1E9PN63 330 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 CYP3A4P08684 503 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 FAM86B2P0C5J1 330 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 SCG2P13521 617 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 TMEM266Q2M3C6 531 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 SWSAP1Q6NVH7 229 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 PDXDC2PQ6P474 469 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 ATP8B4Q8TF62 1192 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 ZNF302Q9NR11 478 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 GINS2Q9Y248 185 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 MRPL42Q9Y6G3 142 aaKnown RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 WDFY4Q6ZS81 3184 aa12.16□□□□□ -0.46
CCDC33-207ENST00000559243 MYH9P35579 1960 aaKnown RBP12.16□□□□□ -0.46
CCDC33-207ENST00000559243 IGLV3-22A0A075B6J6 115 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 IPO5O00410 1097 aaKnown RBP12.15□□□□□ -0.46
CCDC33-207ENST00000559243 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
CCDC33-207ENST00000559243 CSPG5O95196 566 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 MMP1P03956 469 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 CPA1P15085 419 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 HYAL1Q12794 435 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 PAN2Q504Q3 1202 aaKnown RBP12.15□□□□□ -0.46
CCDC33-207ENST00000559243 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
CCDC33-207ENST00000559243 ZNF484Q5JVG2 852 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms