RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 AMNQ9BXJ7 453 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 TMX1Q9H3N1 280 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
TRAV33-201ENST00000557514 TMEM260Q9NX78 707 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 PADI3Q9ULW8 664 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 HCFC2Q9Y5Z7 792 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 R4GN57 208 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 IGSF9BQ9UPX0 1349 aa12.04□□□□□ -0.48
TRAV33-201ENST00000557514 FIBPO43427 364 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 STAM2O75886 525 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 FGAP02671 866 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 MS4A1P11836 297 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 MTHFRP42898 656 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
TRAV33-201ENST00000557514 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
TRAV33-201ENST00000557514 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 PAK2Q13177 524 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 KIAA1841Q6NSI8 718 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
TRAV33-201ENST00000557514 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 NEDD4P46934 1319 aa12.03□□□□□ -0.48
TRAV33-201ENST00000557514 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
TRAV33-201ENST00000557514 LAG3P18627 525 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 ST3GAL2Q16842 350 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
TRAV33-201ENST00000557514 IER5Q5VY09 327 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 MTMR8Q96EF0 704 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 HINFPQ9BQA5 517 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 LRFN2Q9ULH4 789 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 DUSP12Q9UNI6 340 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 KIAA1671Q9BY89 1806 aa12.02□□□□□ -0.49
TRAV33-201ENST00000557514 EOMESO95936 686 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 TCF7P36402 384 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 HAND2P61296 217 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 SP4Q02446 784 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ZC3H14Q6PJT7 736 aaKnown RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 SIX5Q8N196 739 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ESR2Q92731 530 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ZBTB10Q96DT7 871 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 FAM49AQ9H0Q0 323 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 CWH43Q9H720 699 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 TYW1Q9NV66 732 aaKnown RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ERAP1Q9NZ08 941 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 KDM3AQ9Y4C1 1321 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 FAM208BQ5VWN6 2430 aa12.01□□□□□ -0.49
TRAV33-201ENST00000557514 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
TRAV33-201ENST00000557514 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
TRAV33-201ENST00000557514 ZBTB5O15062 677 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 MGEA5O60502 916 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
TRAV33-201ENST00000557514 WEE2P0C1S8 567 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 POLR2MP0CAP2 368 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 MARK3P27448 753 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 PDE4AP27815 886 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 PPM1AP35813 382 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 NT5C2P49902 561 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 TDGQ13569 410 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 FAM102BQ5T8I3 360 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 DCLK2Q8N568 766 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
TRAV33-201ENST00000557514 RNF41Q9H4P4 317 aaPredicted RBP12□□□□□ -0.49
TRAV33-201ENST00000557514 KAT14Q9H8E8 782 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 PLXNA4Q9HCM2 1894 aa12□□□□□ -0.49
TRAV33-201ENST00000557514 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 C9IYK1 514 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 M0QZ92 97 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 RARS2Q5T160 578 aaKnown RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 MRPL43Q8N983 215 aaKnown RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 OTUD7AQ8TE49 926 aaPredicted RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 CELF4Q9BZC1 486 aaKnown RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 C1orf112Q9NSG2 853 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 DBR1Q9UK59 544 aaKnown RBP11.99□□□□□ -0.49
TRAV33-201ENST00000557514 FBXL21Q9UKT6 434 aa11.99□□□□□ -0.49
TRAV33-201ENST00000557514 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms