RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NSFP46459 744 aaKnown RBP16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 KAZNQ674X7 775 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 CHMP6Q96FZ7 201 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 MYMKA6NI61 221 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 BMP6P22004 513 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 SEC24CP53992 1094 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 TMED2Q15363 201 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 PDXDC2PQ6P474 469 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 DNAJC17Q9NVM6 304 aaKnown RBP16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 CFAP157Q5JU67 520 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 TCHHQ07283 1943 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 PHBP35232 272 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 DOK7Q18PE1 504 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 KNOP1Q1ED39 458 aaKnown RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 NT5C1BQ96P26 610 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 PLAGL2Q9UPG8 496 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 TRPC3Q13507 836 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 NAALADL2Q58DX5 795 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 PPP1R21Q6ZMI0 780 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 OR2W6PQ8NHA6 318 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 RAD51CO43502 376 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.199e-10■■■■■ 79.8
ARHGEF40-207ENST00000556399 FAM217BQ9NTX9 383 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
ARHGEF40-207ENST00000556399 FAM237AA0A1B0GTK4 181 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 XKR9Q5GH70 373 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 PROCA1Q8NCQ7 364 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 A0A0U1RQJ8 604 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L6PQ6QN14 398 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 MRPL11Q9Y3B7 192 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 A0A087X0B3 334 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 DKC1O60832 514 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■■■■ 30
ARHGEF40-207ENST00000556399 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 SPICE1Q8N0Z3 855 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 DMGDHQ9UI17 866 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 MIF4GDA9UHW6 222 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 DRP2Q13474 957 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 TBC1D10BQ4KMP7 808 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 POTEGQ6S5H5 508 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 POTEEQ6S8J3 1075 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 LRIG3Q6UXM1 1119 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 CTAGE3PQ8IX95 158 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 NOP53Q9NZM5 478 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 LCMT1Q9UIC8 334 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
ARHGEF40-207ENST00000556399 ZBTB5O15062 677 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 CD19P15391 556 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 HNRNPH1P31943 449 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 FOXR1Q6PIV2 292 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 NSMFQ6X4W1 530 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 ARL8AQ96BM9 186 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 ZNF577Q9BSK1 485 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 TXLNGQ9NUQ3 528 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 STXBP3O00186 592 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 LGSNQ5TDP6 509 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 GBP7Q8N8V2 638 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 CCHCR1Q8TD31 782 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 PTK2Q05397 1052 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 BFSP1Q12934 665 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 PDIA5Q14554 519 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 TAF11Q15544 211 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 TAB3Q8N5C8 712 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms