RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TLR3O15455 904 aaKnown RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 TIMP1P01033 207 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 SUPT20HL2P0C7V6 817 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 GCFC2P16383 781 aaKnown RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 BMP8BP34820 402 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 ADAM17P78536 824 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 ZNF200P98182 395 aaPredicted RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
SRP54-210ENST00000556380 FAM47CQ5HY64 1035 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 C7orf31Q8N865 590 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 VWCEQ96DN2 955 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 NOC4LQ9BVI4 516 aaKnown RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 SMARCAD1Q9H4L7 1026 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 PRDM5Q9NQX1 630 aaPredicted RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 GTF2IRD1Q9UHL9 959 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 SMC3Q9UQE7 1217 aa10.92□□□□□ -0.66
SRP54-210ENST00000556380 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.92□□□□□ -0.66
SRP54-210ENST00000556380 DOCK5Q9H7D0 1870 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 DDX39AO00148 427 aaKnown RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 TBX3O15119 743 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 CCNT1O60563 726 aaKnown RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 SMIM10L2AP0DMW4 78 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 SMIM10L2BP0DMW5 78 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 CYP2C9P11712 490 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 ATP4AP20648 1035 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 KRT76Q01546 638 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 TRIM71Q2Q1W2 868 aaKnown RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 LRCH2Q5VUJ6 765 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 MFSD5Q6N075 450 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 CCDC60Q8IWA6 550 aaPredicted RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 SMAP1Q8IYB5 467 aaPredicted RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 AFAP1L1Q8TED9 768 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 BADQ92934 168 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 MTMR9Q96QG7 549 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 NAP1L4Q99733 375 aaKnown RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 UNC45AQ9H3U1 944 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 ERAP1Q9NZ08 941 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 PRKAG2Q9UGJ0 569 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 KIF3AQ9Y496 699 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 MAFBQ9Y5Q3 323 aaPredicted RBP10.91□□□□□ -0.66
SRP54-210ENST00000556380 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
SRP54-210ENST00000556380 UMODL1Q5DID0 1318 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 GAS7O60861 476 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 RAG1P15918 1043 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 TOB1P50616 345 aaPredicted RBP10.9□□□□□ -0.66
SRP54-210ENST00000556380 STAT5BP51692 787 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 EPHB4P54760 987 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
SRP54-210ENST00000556380 RBL2Q08999 1139 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 PLCB4Q15147 1175 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 PTGISQ16647 500 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 MARCH8Q5T0T0 291 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 MIS18BP1Q6P0N0 1132 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 GLG1Q92896 1179 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 WNT8BQ93098 351 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 TEKT3Q9BXF9 490 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 WNT8AQ9H1J5 351 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 HIPK3Q9H422 1215 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 SETD4Q9NVD3 440 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
SRP54-210ENST00000556380 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.66
SRP54-210ENST00000556380 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
SRP54-210ENST00000556380 NRCAMQ92823 1304 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 C17orf102A2RUQ5 167 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
SRP54-210ENST00000556380 WDR64B1ANS9 1081 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 ZBTB42B2RXF5 422 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 TREHO43280 583 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 ZNF862O60290 1169 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 PSAPP07602 524 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 INSRRP14616 1297 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 MARK3P27448 753 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 SFNP31947 248 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 CYP2C18P33260 490 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 SLC26A2P50443 739 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 SPIRE1Q08AE8 756 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 PTK7Q13308 1070 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 PPP2R5CQ13362 524 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 GPNMBQ14956 572 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
SRP54-210ENST00000556380 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 C16orf59Q7L2K0 433 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 SERINC5Q86VE9 423 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 RDM1Q8NG50 284 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 LMBR1Q8WVP7 490 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 LBHD1Q9BQE6 289 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms