RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 NLRX1Q86UT6 975 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 TTC17Q96AE7 1141 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 NCK2O43639 380 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 CCDC117Q8IWD4 279 aaPredicted RBP18.82■□□□□ 0.6
SYNE3-204ENST00000555759 CHURC1Q8WUH1 139 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 IPO11Q9UI26 975 aaKnown RBP18.82■□□□□ 0.6
SYNE3-204ENST00000555759 TLK1Q9UKI8 766 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 NUB1Q9Y5A7 615 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
SYNE3-204ENST00000555759 TRPM8Q7Z2W7 1104 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 RASGRP4Q8TDF6 673 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 MTA3Q9BTC8 594 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 A6NJR5 290 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 CCT8L1PA6NM43 557 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 CDC25AP30304 524 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 PTGISQ16647 500 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 PFDN6O15212 129 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 ADORA1P30542 326 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 DDB1Q16531 1140 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 STAG2Q8N3U4 1231 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 SATB2Q9UPW6 733 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 SERPINB4P48594 390 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 TMEM154Q6P9G4 183 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 DNAJC9Q8WXX5 260 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 TTC1Q99614 292 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 ZNF711Q9Y462 761 aa18.81■□□□□ 0.6
SYNE3-204ENST00000555759 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 KRT38O76015 456 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 TJP3O95049 919 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 XKR9Q5GH70 373 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 ADAMTS12P58397 1594 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 PRPSAP1Q14558 356 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 MMGT1Q8N4V1 131 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 ZC4H2Q9NQZ6 224 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 TRPC5Q9UL62 973 aaPredicted RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 TTLL3Q9Y4R7 772 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 SLC4A7Q9Y6M7 1214 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 NVLO15381 856 aaKnown RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 PRR29P0C7W0 189 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 FAM83BQ5T0W9 1011 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 GPATCH4Q5T3I0 446 aaKnown RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 IRX2Q9BZI1 471 aaPredicted RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 PUS7LQ9H0K6 701 aaKnown RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 HESX1Q9UBX0 185 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 TRIM49BA6NDI0 452 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 POLR2MP0CAP2 368 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 ABCD1P33897 745 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 PHKA1P46020 1223 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 WDR93Q6P2C0 686 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 CYB5D1Q6P9G0 228 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 SHC4Q6S5L8 630 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 MRPL11Q9Y3B7 192 aaKnown RBP18.8■□□□□ 0.6
SYNE3-204ENST00000555759 RIMBP2O15034 1052 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 DNAJC24Q6P3W2 148 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 HIPK4Q8NE63 616 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 POMGNT1Q8WZA1 660 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
SYNE3-204ENST00000555759 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
SYNE3-204ENST00000555759 KCNA3P22001 575 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 ALCAMQ13740 583 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 TC2NQ8N9U0 490 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 PLA2G4BP0C869 781 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 GPC5P78333 572 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
SYNE3-204ENST00000555759 MED21Q13503 144 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 DARS2Q6PI48 645 aaKnown RBP18.79■□□□□ 0.6
SYNE3-204ENST00000555759 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 SAT1P21673 171 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 MXI1P50539 228 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 STAT4Q14765 748 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 RBM41Q96IZ5 413 aaKnown RBP18.79■□□□□ 0.6
SYNE3-204ENST00000555759 TUBE1Q9UJT0 475 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 SRGAP2BP0DMP2 458 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 CHN1P15882 459 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 NR1I3Q14994 352 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 KDM7AQ6ZMT4 941 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 TRIM33Q9UPN9 1127 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
SYNE3-204ENST00000555759 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
SYNE3-204ENST00000555759 ATP7AQ04656 1500 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 BCAMP50895 628 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 RIOK1Q9BRS2 568 aaKnown RBP18.78■□□□□ 0.6
SYNE3-204ENST00000555759 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
SYNE3-204ENST00000555759 TCP11X1B4DZS4 312 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 ZBED4O75132 1171 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 GABPAQ06546 454 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 PRMT1Q99873 361 aaKnown RBP18.78■□□□□ 0.6
SYNE3-204ENST00000555759 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
SYNE3-204ENST00000555759 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms