RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLKQ9H2G2 1235 aaPredicted RBP20.69■□□□□ 0.9
SHMT2-206ENST00000553529 CDHR5Q9HBB8 845 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 MYO9BQ13459 2157 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 COL4A6Q14031 1691 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 POTEB3A0JP26 581 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 LINC01553A4QN01 128 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 TMEM150BA6NC51 233 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 JAK2O60674 1132 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 FDPSP14324 419 aaKnown RBP20.68■□□□□ 0.9
SHMT2-206ENST00000553529 POTEBQ6S5H4 581 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 PLPPR4Q7Z2D5 763 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 BLIDQ8IZY5 108 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
SHMT2-206ENST00000553529 ZNF302Q9NR11 478 aa20.68■□□□□ 0.9
SHMT2-206ENST00000553529 SLC37A4O43826 429 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 PARNO95453 639 aaKnown RBP20.67■□□□□ 0.9
SHMT2-206ENST00000553529 CD52P31358 61 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 GRB10Q13322 594 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 INF2Q27J81 1249 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 TMEM266Q2M3C6 531 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 FBXO47Q5MNV8 452 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 PDXDC2PQ6P474 469 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 MTHFD1LQ6UB35 978 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 SEPT8Q92599 483 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 C17orf80Q9BSJ5 609 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 UNC45AQ9H3U1 944 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 SH3GLB2Q9NR46 395 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 GABBR1Q9UBS5 961 aa20.67■□□□□ 0.9
SHMT2-206ENST00000553529 ZNF862O60290 1169 aa20.66■□□□□ 0.9
SHMT2-206ENST00000553529 KLRC1P26715 233 aa20.66■□□□□ 0.9
SHMT2-206ENST00000553529 MRPS6P82932 125 aaKnown RBP20.66■□□□□ 0.9
SHMT2-206ENST00000553529 ATP8B4Q8TF62 1192 aa20.66■□□□□ 0.9
SHMT2-206ENST00000553529 ZNF668Q96K58 619 aaPredicted RBP20.66■□□□□ 0.9
SHMT2-206ENST00000553529 SH2D3AQ9BRG2 576 aa20.66■□□□□ 0.9
SHMT2-206ENST00000553529 PHF20Q9BVI0 1012 aa20.66■□□□□ 0.9
SHMT2-206ENST00000553529 WNT7AO00755 349 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 CAND2O75155 1236 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 IBSPP21815 317 aaPredicted RBP20.65■□□□□ 0.9
SHMT2-206ENST00000553529 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
SHMT2-206ENST00000553529 C8orf34Q49A92 452 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 MIS18BP1Q6P0N0 1132 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 TAF2Q6P1X5 1199 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 RTN4RL1Q86UN2 441 aaPredicted RBP20.65■□□□□ 0.9
SHMT2-206ENST00000553529 BICD2Q8TD16 824 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 TMEM40Q8WWA1 233 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 MTCH2Q9Y6C9 303 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 VCANP13611 3396 aa20.65■□□□□ 0.9
SHMT2-206ENST00000553529 KIF28PB7ZC32 967 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 AMHP03971 560 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 NEK4P51957 841 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 ANAPC15P60006 121 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 RPAINQ86UA6 219 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 CKAP2LQ8IYA6 745 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 DAGLBQ8NCG7 672 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 SLC5A5Q92911 643 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 IL17RAQ96F46 866 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 RAD9AQ99638 391 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 SUGCTQ9HAC7 445 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 GINS2Q9Y248 185 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 PCDHA2Q9Y5H9 948 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 MAFBQ9Y5Q3 323 aaPredicted RBP20.64■□□□□ 0.89
SHMT2-206ENST00000553529 EVPLQ92817 2033 aa20.64■□□□□ 0.89
SHMT2-206ENST00000553529 IGSF9BQ9UPX0 1349 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 C22orf31O95567 290 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 GATMP50440 423 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 HTRA4P83105 476 aaPredicted RBP20.63■□□□□ 0.89
SHMT2-206ENST00000553529 TFF2Q03403 129 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 NR5A1Q13285 461 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 ZNF746Q6NUN9 644 aaPredicted RBP20.63■□□□□ 0.89
SHMT2-206ENST00000553529 KIAA0319LQ8IZA0 1049 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
SHMT2-206ENST00000553529 GTF3C6Q969F1 213 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 TMX1Q9H3N1 280 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 ORC3Q9UBD5 711 aaPredicted RBP20.63■□□□□ 0.89
SHMT2-206ENST00000553529 SAMM50Q9Y512 469 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 TRPV2Q9Y5S1 764 aa20.63■□□□□ 0.89
SHMT2-206ENST00000553529 STK36Q9NRP7 1315 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 RRN3P2A6NIE6 340 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 PSMD10O75832 226 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 VTNP04004 478 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 CLCN3P51790 818 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 LETM2Q2VYF4 491 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 LRCH2Q5VUJ6 765 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 FAM160B1Q5W0V3 765 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 PIK3AP1Q6ZUJ8 805 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 LRRC71Q8N4P6 559 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 ETNPPLQ8TBG4 499 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 TOP1MTQ969P6 601 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 KIF2CQ99661 725 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 DISC1Q9NRI5 854 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 MYH9P35579 1960 aaKnown RBP20.62■□□□□ 0.89
SHMT2-206ENST00000553529 ATG2AQ2TAZ0 1938 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 PRRC2BQ5JSZ5 2229 aaKnown RBP20.62■□□□□ 0.89
SHMT2-206ENST00000553529 NLRC5Q86WI3 1866 aa20.62■□□□□ 0.89
SHMT2-206ENST00000553529 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
SHMT2-206ENST00000553529 ENPP3O14638 875 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 HBP1O60381 514 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 MGEA5O60502 916 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms