RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CRIPAKQ8N1N5 446 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 NME8Q8N427 588 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 LINC01599Q8WXQ3 324 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 PGBD1Q96JS3 809 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 BARHL2Q9NY43 387 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 IGSF9BQ9UPX0 1349 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 KDM3AQ9Y4C1 1321 aa23.57■■□□□ 1.36
CACNB3-218ENST00000550771 SMIM35A0A1B0GVV1 85 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 POTEB3A0JP26 581 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 SSTR3P32745 418 aaPredicted RBP23.56■■□□□ 1.36
CACNB3-218ENST00000550771 CLK2P49760 499 aaKnown RBP23.56■■□□□ 1.36
CACNB3-218ENST00000550771 POTEBQ6S5H4 581 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 NIPA1Q7RTP0 329 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 NPAS4Q8IUM7 802 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 CMTR2Q8IYT2 770 aaKnown RBP23.56■■□□□ 1.36
CACNB3-218ENST00000550771 TCEANC2Q96MN5 208 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 CELF4Q9BZC1 486 aaKnown RBP23.56■■□□□ 1.36
CACNB3-218ENST00000550771 CLDND1Q9NY35 253 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 PADI3Q9ULW8 664 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 NLRC5Q86WI3 1866 aa23.56■■□□□ 1.36
CACNB3-218ENST00000550771 IGKV6D-21A0A0A0MT36 114 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 KRT32Q14532 448 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 CTC1Q2NKJ3 1217 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 EP400NLQ6ZTU2 488 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 RTN4RL1Q86UN2 441 aaPredicted RBP23.55■■□□□ 1.36
CACNB3-218ENST00000550771 TRAPPC12Q8WVT3 735 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 FAM217BQ9NTX9 383 aaPredicted RBP23.55■■□□□ 1.36
CACNB3-218ENST00000550771 PRKAG3Q9UGI9 489 aa23.55■■□□□ 1.36
CACNB3-218ENST00000550771 GOLGA8AA7E2F4 631 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 GOLGA8BA8MQT2 603 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 MMP1P03956 469 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 LTBRP36941 435 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 TMEM62Q0P6H9 643 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 PAK2Q13177 524 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 NAALADL2Q58DX5 795 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 MTHFD1LQ6UB35 978 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 RASEFQ8IZ41 740 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 P2RX5Q93086 422 aa23.54■■□□□ 1.36
CACNB3-218ENST00000550771 HBP1O60381 514 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 HMGB1P09429 215 aaKnown RBP23.53■■□□□ 1.36
CACNB3-218ENST00000550771 STAG3L1P0CL83 205 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 ALADP13716 330 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 ZNF76P36508 570 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 KRT76Q01546 638 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 HYAL1Q12794 435 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 ADCK5Q3MIX3 580 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 ABHD15Q6UXT9 468 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 ATP8B4Q8TF62 1192 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 TMEM260Q9NX78 707 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 PLAGL2Q9UPG8 496 aa23.53■■□□□ 1.36
CACNB3-218ENST00000550771 MRPL42Q9Y6G3 142 aaKnown RBP23.53■■□□□ 1.36
CACNB3-218ENST00000550771 KLF18A0A0U1RQI7 1052 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 FAM86C2PA6NEL3 165 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 CCNE2O96020 404 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 CDC27P30260 824 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 FAM160B1Q5W0V3 765 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 MYO7AQ13402 2215 aa23.52■■□□□ 1.36
CACNB3-218ENST00000550771 CCDC196A0A1B0GTZ2 297 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 PRR33A8MZF0 331 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 FAM86B1E9PN63 330 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 BACH1O14867 736 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 FAM86B2P0C5J1 330 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 SCG2P13521 617 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 KLRC1P26715 233 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 ZP2Q05996 745 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 PFKFB3Q16875 520 aaPredicted RBP23.51■■□□□ 1.35
CACNB3-218ENST00000550771 PLA2G4DQ86XP0 818 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 CRYGNQ8WXF5 182 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 TMX1Q9H3N1 280 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 COL1A2P08123 1366 aa23.51■■□□□ 1.35
CACNB3-218ENST00000550771 ESYT2A0FGR8 921 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 C19orf67A6NJJ6 358 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 DDX39AO00148 427 aaKnown RBP23.5■■□□□ 1.35
CACNB3-218ENST00000550771 CYP3A4P08684 503 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 CAMK1Q14012 370 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 MCTP2Q6DN12 878 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 MIS18BP1Q6P0N0 1132 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 CENPQQ7L2Z9 268 aaPredicted RBP23.5■■□□□ 1.35
CACNB3-218ENST00000550771 ADHFE1Q8IWW8 467 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 ALG13Q9NP73 1137 aaKnown RBP23.5■■□□□ 1.35
CACNB3-218ENST00000550771 ZNF302Q9NR11 478 aa23.5■■□□□ 1.35
CACNB3-218ENST00000550771 IGLV3-22A0A075B6J6 115 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 IPO5O00410 1097 aaKnown RBP23.49■■□□□ 1.35
CACNB3-218ENST00000550771 DHX15O43143 795 aaKnown RBP23.49■■□□□ 1.35
CACNB3-218ENST00000550771 SMAD2Q15796 467 aaKnown RBP23.49■■□□□ 1.35
CACNB3-218ENST00000550771 ZNF484Q5JVG2 852 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 JAKMIP3Q5VZ66 844 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 PDXDC2PQ6P474 469 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 CCDC60Q8IWA6 550 aaPredicted RBP23.49■■□□□ 1.35
CACNB3-218ENST00000550771 KIAA0319LQ8IZA0 1049 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 PPP2R3CQ969Q6 453 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 ZMYND12Q9H0C1 365 aa23.49■■□□□ 1.35
CACNB3-218ENST00000550771 DCXO43602 365 aa23.48■■□□□ 1.35
CACNB3-218ENST00000550771 CDC45O75419 566 aa23.48■■□□□ 1.35
CACNB3-218ENST00000550771 ITGB1P05556 798 aa23.48■■□□□ 1.35
CACNB3-218ENST00000550771 ADD1P35611 737 aaKnown RBP23.48■■□□□ 1.35
CACNB3-218ENST00000550771 SARSP49591 514 aaKnown RBP23.48■■□□□ 1.35
CACNB3-218ENST00000550771 METAP2P50579 478 aaKnown RBP eCLIP23.48■■□□□ 1.35
CACNB3-218ENST00000550771 DLX2Q07687 328 aaPredicted RBP23.48■■□□□ 1.35
CACNB3-218ENST00000550771 NFX1Q12986 1120 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms