RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 PRLRP16471 622 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 SLCO1A2P46721 670 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 PICALMQ13492 652 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 FAM26FQ5R3K3 315 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 HGSNATQ68CP4 663 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 STYK1Q6J9G0 422 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 EYA3Q99504 573 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 NEUROG2Q9H2A3 272 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 GDF3Q9NR23 364 aa11.75□□□□□ -0.53
SMARCC2-208ENST00000550150 GMNCA6NCL1 334 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 FAM107AO95990 144 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 EPB41P11171 864 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 SLC9A1P19634 815 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 ADAM9Q13443 819 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 GRM4Q14833 912 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 FIGNQ5HY92 759 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 ODF2LQ9ULJ1 636 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 SCP2P22307 547 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 CDK17Q00537 523 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 PTK2Q05397 1052 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 PPP1R7Q15435 360 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 CACNA2D3Q8IZS8 1091 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 ARFGAP2Q8N6H7 521 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 ZKSCAN4Q969J2 545 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 DDX20Q9UHI6 824 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
SMARCC2-208ENST00000550150 MEIS1O00470 390 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 LAD1O00515 517 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 SCNN1DP51172 638 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 COASYQ13057 564 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 SLC18A3Q16572 532 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 GLE1Q53GS7 698 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 PNMA5Q96PV4 448 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CLTAP09496 248 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 KRT13P13646 458 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 SLC16A2P36021 539 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 PTGER2P43116 358 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 FNTAP49354 379 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 ZNF211Q13398 564 aaPredicted RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 NAB2Q15742 525 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 GUF1Q8N442 669 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 LRRC4CQ9HCJ2 640 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CEP72Q9P209 647 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 NOC2LQ9Y3T9 749 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 TMEM110-MUSTN1A8MSY1 372 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CHUKO15111 745 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 NR2F2P24468 414 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 SNCBQ16143 134 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 ECM1Q16610 540 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 FAM133BQ5BKY9 247 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 RNF10Q8N5U6 811 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 MGARPQ8TDB4 240 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 CD2APQ9Y5K6 639 aa11.73□□□□□ -0.53
SMARCC2-208ENST00000550150 EIF4E1BA6NMX2 242 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 PRELPP51888 382 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 RHBDL3P58872 404 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 LRRC63Q05C16 580 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 ZNF844Q08AG5 666 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 NAA25Q14CX7 972 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 MEI1Q5TIA1 1274 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 GPBP1Q86WP2 473 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 RAD54LQ92698 747 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 LRRC45Q96CN5 670 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 PNMA2Q9UL42 364 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 SUFUQ9UMX1 484 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms