RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MBTPS2O43462 519 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 TBX10O75333 385 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 DNAJB1P25685 340 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 GATMP50440 423 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 CSPP1Q1MSJ5 1256 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 NPAS4Q8IUM7 802 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 CMTR2Q8IYT2 770 aaKnown RBP17.61■□□□□ 0.41
RAB5C-205ENST00000550013 SDF4Q9BRK5 362 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 PLVAPQ9BX97 442 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 SQORQ9Y6N5 450 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 NFASCO94856 1347 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 PLXNA4Q9HCM2 1894 aa17.61■□□□□ 0.41
RAB5C-205ENST00000550013 M0QZ92 97 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 RPLP2P05387 115 aaKnown RBP17.6■□□□□ 0.41
RAB5C-205ENST00000550013 ITGB1P05556 798 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
RAB5C-205ENST00000550013 IRS1P35568 1242 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 STAT5BP51692 787 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 NAPAP54920 295 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 PAK2Q13177 524 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 SMAD2Q15796 467 aaKnown RBP17.6■□□□□ 0.41
RAB5C-205ENST00000550013 TMEM266Q2M3C6 531 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 ANO3Q9BYT9 981 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 CELF4Q9BZC1 486 aaKnown RBP17.6■□□□□ 0.41
RAB5C-205ENST00000550013 TMX1Q9H3N1 280 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
RAB5C-205ENST00000550013 RIC8AQ9NPQ8 531 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 IGSF9BQ9UPX0 1349 aa17.6■□□□□ 0.41
RAB5C-205ENST00000550013 WDFY4Q6ZS81 3184 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 SCG2P13521 617 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 ADCY7P51828 1080 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 FUT2Q10981 343 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 ADAM15Q13444 863 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 ADGRD2Q7Z7M1 963 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 KLHL23Q8NBE8 558 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 SPPL3Q8TCT6 385 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 P2RX5Q93086 422 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 TMEM260Q9NX78 707 aa17.59■□□□□ 0.41
RAB5C-205ENST00000550013 FNDC1Q4ZHG4 1894 aaPredicted RBP17.58■□□□□ 0.41
RAB5C-205ENST00000550013 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 DDX39AO00148 427 aaKnown RBP17.58■□□□□ 0.4
RAB5C-205ENST00000550013 STXBP3O00186 592 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 CCNE2O96020 404 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 KRT76Q01546 638 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 SMAD4Q13485 552 aaKnown RBP17.58■□□□□ 0.4
RAB5C-205ENST00000550013 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 SYNE3Q6ZMZ3 975 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 CD207Q9UJ71 328 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 PCDHGC5Q9Y5F6 944 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
RAB5C-205ENST00000550013 ZNF318Q5VUA4 2279 aa17.58■□□□□ 0.4
RAB5C-205ENST00000550013 KDM3AQ9Y4C1 1321 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 MEIS1O00470 390 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 MGEA5O60502 916 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 ATG7O95352 703 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 FOSP01100 380 aaPredicted RBP17.57■□□□□ 0.4
RAB5C-205ENST00000550013 STAG3L1P0CL83 205 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 KLRC1P26715 233 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 NDUFV1P49821 464 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 RTN1Q16799 776 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
RAB5C-205ENST00000550013 MSLNLQ96KJ4 702 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 CDHR5Q9HBB8 845 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 RBM28Q9NW13 759 aaKnown RBP17.57■□□□□ 0.4
RAB5C-205ENST00000550013 MUTYHQ9UIF7 546 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 LRFN2Q9ULH4 789 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 GINS2Q9Y248 185 aa17.57■□□□□ 0.4
RAB5C-205ENST00000550013 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 SMCO2A6NFE2 343 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 ZBTB43O43298 467 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 SREBF1P36956 1147 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 NAALADL2Q58DX5 795 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 NME8Q8N427 588 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 POF1BQ8WVV4 589 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 POP1Q99575 1024 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 CLEC1BQ9P126 229 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 NOC2LQ9Y3T9 749 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 MYH9P35579 1960 aaKnown RBP17.56■□□□□ 0.4
RAB5C-205ENST00000550013 TECTAO75443 2155 aa17.56■□□□□ 0.4
RAB5C-205ENST00000550013 BACH1O14867 736 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 ZNF76P36508 570 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 NRIP1P48552 1158 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
RAB5C-205ENST00000550013 CLK2P49760 499 aaKnown RBP17.55■□□□□ 0.4
RAB5C-205ENST00000550013 ABHD15Q6UXT9 468 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms