RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GRIK5Q16478 980 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 KRT71Q3SY84 523 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 AGBL2Q5U5Z8 902 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 PRR5LQ6MZQ0 368 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 IRF2BP2Q7Z5L9 587 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 TATDN2Q93075 761 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 EYA3Q99504 573 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 LRRC27Q9C0I9 530 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 UBR3Q6ZT12 1888 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 NPHP3-ACAD11A0A0J9YXS1 232 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 ESYT2A0FGR8 921 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 TTI1O43156 1089 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 SCTRP47872 440 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 TNNI2P48788 182 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 NT5C2P49902 561 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 PDIA5Q14554 519 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 SGSM3Q96HU1 749 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 UIMC1Q96RL1 719 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 CELF4Q9BZC1 486 aaKnown RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 FRMPD2Q68DX3 1309 aaPredicted RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 TNRC6CQ9HCJ0 1690 aaKnown RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 OPLAHO14841 1288 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 GNA14O95837 355 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 SLC9A1P19634 815 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 MARSP56192 900 aaKnown RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 KCNH2Q12809 1159 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 MTMR3Q13615 1198 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 ZNF772Q68DY9 489 aaPredicted RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 SCFD1Q8WVM8 642 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
HDAC7-228ENST00000548938 TPX2Q9ULW0 747 aaKnown RBP14.99□□□□□ -0.01
HDAC7-228ENST00000548938 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
HDAC7-228ENST00000548938 ELF1P32519 619 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 ADCY7P51828 1080 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
HDAC7-228ENST00000548938 WLSQ5T9L3 541 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 RPAINQ86UA6 219 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 TPCN2Q8NHX9 752 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 MDM1Q8TC05 714 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 CEP95Q96GE4 821 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 ANKRD2Q9GZV1 360 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 KCTD10Q9H3F6 313 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 PCDHA2Q9Y5H9 948 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 E9PMD0 336 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 F8VZ95 297 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 C21orf2O43822 256 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 ADAM9Q13443 819 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 SPTY2D1Q68D10 685 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-228ENST00000548938 ALKBH5Q6P6C2 394 aaKnown RBP14.98□□□□□ -0.01
HDAC7-228ENST00000548938 N4BP2L2Q92802 583 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-228ENST00000548938 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 NAV1Q8NEY1 1877 aa14.98□□□□□ -0.01
HDAC7-228ENST00000548938 DRD4P21917 467 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 CDK8P49336 464 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 UBE2SQ16763 222 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 GKAP1Q5VSY0 366 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 DPY19L2P1Q6NXN4 242 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 CCDC188H7C350 402 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 SERPINB2P05120 415 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 UCHL3P15374 230 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 HOXA7P31268 230 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 NF2P35240 595 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 IFI16Q16666 785 aaKnown RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 HERC4Q5GLZ8 1057 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 C10orf76Q5T2E6 689 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 CPLX4Q7Z7G2 160 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 RBM46Q8TBY0 533 aaKnown RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 HAS1Q92839 578 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 PSMD1Q99460 953 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 TACO1Q9BSH4 297 aaKnown RBP14.97□□□□□ -0.01
HDAC7-228ENST00000548938 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 TRIM31Q9BZY9 425 aa14.97□□□□□ -0.01
HDAC7-228ENST00000548938 F8W031 263 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 GRAPQ13588 217 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 SEPT2Q15019 361 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 E2F5Q15329 346 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 LACTB2Q53H82 288 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 CHADLQ6NUI6 762 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 NEDD1Q8NHV4 660 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 GRAPLQ8TC17 118 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 CCT6BQ92526 530 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 HVCN1Q96D96 273 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 AJAP1Q9UKB5 411 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 MYH7BA7E2Y1 1941 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 NR2F2P24468 414 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 CCDC65Q8IXS2 484 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 ZHX3Q9H4I2 956 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 SLITRK6Q9H5Y7 841 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 RIOX1Q9H6W3 641 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms