RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 PHKBQ93100 1093 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 HLA-CQ95604 372 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 SQORQ9Y6N5 450 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 SMIM35A0A1B0GVV1 85 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
COL2A1-209ENST00000546974 ENPP3O14638 875 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 HBP1O60381 514 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 CCNE2O96020 404 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 IFNAR1P17181 557 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
COL2A1-209ENST00000546974 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
COL2A1-209ENST00000546974 EPC2Q52LR7 807 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 FAM160B1Q5W0V3 765 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 NME8Q8N427 588 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 FAM49AQ9H0Q0 323 aaPredicted RBP16.35■□□□□ 0.21
COL2A1-209ENST00000546974 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
COL2A1-209ENST00000546974 M0QZ92 97 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 DDX39AO00148 427 aaKnown RBP16.34■□□□□ 0.21
COL2A1-209ENST00000546974 BACH1O14867 736 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 CIITAP33076 1130 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 MIS18BP1Q6P0N0 1132 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 MTHFD1LQ6UB35 978 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 ZNF577Q9BSK1 485 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
COL2A1-209ENST00000546974 TBC1D22BQ9NU19 505 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 TRPV2Q9Y5S1 764 aa16.34■□□□□ 0.21
COL2A1-209ENST00000546974 H3BNC9 293 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 KCNQ1P51787 676 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 PTPROQ16827 1216 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 ZNF746Q6NUN9 644 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 CCDC60Q8IWA6 550 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 FIBCD1Q8N539 461 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 MRPL38Q96DV4 380 aaKnown RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 CELF4Q9BZC1 486 aaKnown RBP16.33■□□□□ 0.2
COL2A1-209ENST00000546974 ZNF302Q9NR11 478 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 SH3GLB2Q9NR46 395 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 KDM3AQ9Y4C1 1321 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 COL1A2P08123 1366 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 MYO7AQ13402 2215 aa16.33■□□□□ 0.2
COL2A1-209ENST00000546974 KLRC1P26715 233 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 CD52P31358 61 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 GPM6BQ13491 265 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 ZNF484Q5JVG2 852 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 SWSAP1Q6NVH7 229 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 PDXDC2PQ6P474 469 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 FAM43BQ6ZT52 329 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-209ENST00000546974 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-209ENST00000546974 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 RC3H2Q9HBD1 1191 aaKnown RBP16.32■□□□□ 0.2
COL2A1-209ENST00000546974 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
COL2A1-209ENST00000546974 IGSF9BQ9UPX0 1349 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
COL2A1-209ENST00000546974 ADGRA3Q8IWK6 1321 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-209ENST00000546974 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 RB1P06400 928 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 ATP4AP20648 1035 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 KRT76Q01546 638 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 TMEM62Q0P6H9 643 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 PRR16Q569H4 304 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 RASGRP4Q8TDF6 673 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 ZNF689Q96CS4 500 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-209ENST00000546974 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-209ENST00000546974 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 PADI3Q9ULW8 664 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
COL2A1-209ENST00000546974 MAFBQ9Y5Q3 323 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-209ENST00000546974 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 PSAPP07602 524 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 USP11P51784 963 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 PAK2Q13177 524 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 RTN4RL1Q86UN2 441 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 KIAA0319LQ8IZA0 1049 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 LINC01599Q8WXQ3 324 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 LENG9Q96B70 501 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 NECAB3Q96P71 396 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 UBE2ZQ9H832 354 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-209ENST00000546974 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
COL2A1-209ENST00000546974 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 EDIL3O43854 480 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 DGKIO75912 1065 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms