RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 HPXP02790 462 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 DBHP09172 617 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 RBP3P10745 1247 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 HTRA3P83110 453 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 PLCL1Q15111 1095 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 GPR158Q5T848 1215 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 TCEAL8Q8IYN2 117 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 SEC14L1Q92503 715 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 ERCC4Q92889 916 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-207ENST00000544052 ANO3Q9BYT9 981 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 MBNL3Q9NUK0 354 aaKnown RBP4.89□□□□□ -1.63
SCFD1-207ENST00000544052 GEMIN8Q9NWZ8 242 aaKnown RBP4.89□□□□□ -1.63
SCFD1-207ENST00000544052 ANGEL1Q9UNK9 670 aaKnown RBP4.89□□□□□ -1.63
SCFD1-207ENST00000544052 ZNF652Q9Y2D9 606 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 RNF114Q9Y508 228 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 PCDHB4Q9Y5E5 795 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 SMARCA2P51531 1590 aa4.89□□□□□ -1.63
SCFD1-207ENST00000544052 BAZ1AQ9NRL2 1556 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-207ENST00000544052 MMEP08473 750 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CLEC2LP0C7M8 214 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CD40P25942 277 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 GDNFP39905 211 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CHRNA2Q15822 529 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 MAP9Q49MG5 647 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 FRMD7Q6ZUT3 714 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 DCP2Q8IU60 420 aaKnown RBP4.88□□□□□ -1.63
SCFD1-207ENST00000544052 MAGEB6Q8N7X4 407 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 AP5M1Q9H0R1 490 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 POFUT1Q9H488 388 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 BCAS3Q9H6U6 928 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CCM2LQ9NUG4 571 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-207ENST00000544052 ZBTB21Q9ULJ3 1066 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 THOC2Q8NI27 1593 aaKnown RBP4.88□□□□□ -1.63
SCFD1-207ENST00000544052 KIF21AQ7Z4S6 1674 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 KIF3BO15066 747 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 FOXP2O15409 715 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 RNASE1P07998 156 aaKnown RBP4.88□□□□□ -1.63
SCFD1-207ENST00000544052 RECQLP46063 649 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-207ENST00000544052 ACAP2Q15057 778 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CT83Q5H943 113 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 NXNQ6DKJ4 435 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CYP4F22Q6NT55 531 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 TP53INP2Q8IXH6 220 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 NETO2Q8NC67 525 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 PHOSPHO1Q8TCT1 267 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 ASB15Q8WXK1 588 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 MYLIPQ8WY64 445 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 SLC2A13Q96QE2 648 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 CAMKK2Q96RR4 588 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 TCF7L1Q9HCS4 588 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 TNFRSF12AQ9NP84 129 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 EDARQ9UNE0 448 aa4.88□□□□□ -1.63
SCFD1-207ENST00000544052 TRIM75PA6NK02 468 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 NUDT19A8MXV4 375 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 F8W031 263 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 SDHAP31040 664 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 GJA4P35212 333 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ARL4AP40617 200 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 AMOTL1Q8IY63 956 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ZZZ3Q8IYH5 903 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 GBP4Q96PP9 640 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 NUB1Q9Y5A7 615 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 MRFAP1Q9Y605 127 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 KLHL33A6NCF5 533 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ZRANB2O95218 330 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 OSMP13725 252 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 PNLIPP16233 465 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 SRSF2Q01130 221 aaKnown RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 RGL3Q3MIN7 710 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 PAN2Q504Q3 1202 aaKnown RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 CXorf67Q86X51 503 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 TRIM48Q8IWZ4 208 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 CMTR2Q8IYT2 770 aaKnown RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 JADE3Q92613 823 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 EAF2Q96CJ1 260 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 FOXRED1Q96CU9 486 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 TEKT5Q96M29 485 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 LRGUKQ96M69 825 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ORAI2Q96SN7 254 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 POLR3GLQ9BT43 218 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ANLNQ9NQW6 1124 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 DNAJC28Q9NX36 388 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 DBR1Q9UK59 544 aaKnown RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 CTNND2Q9UQB3 1225 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ANKRD6Q9Y2G4 727 aa4.87□□□□□ -1.63
SCFD1-207ENST00000544052 ARID4BQ4LE39 1312 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-207ENST00000544052 WIZO95785 1651 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 VSTM5A8MXK1 200 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 ELL2O00472 640 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-207ENST00000544052 SRGAP3O43295 1099 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 APOL3O95236 402 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 CYBBP04839 570 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 LPLP06858 475 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 THBS2P35442 1172 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 FNTBP49356 437 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 MOGSQ13724 837 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 EPHA7Q15375 998 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 TOR2AQ5JU69 321 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms