RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 DAAM1Q9Y4D1 1078 aa15.02□□□□□ -0.01
VPS33A-208ENST00000543633 GCOM1H8Y6P7 765 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-208ENST00000543633 PDXKO00764 312 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 KCNK3O14649 394 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 TBX3O15119 743 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 MYZAPP0CAP1 466 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 ECHS1P30084 290 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 ATP1A2P50993 1020 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 SLC12A3P55017 1021 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 ERVK-9P63128 1117 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 UBE2SQ16763 222 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 BMT2Q1RMZ1 405 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 KCTD16Q68DU8 428 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 MAATS1Q7Z4T9 603 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 NLRP14Q86W24 1093 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 MYCBPAPQ8TBZ2 947 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 SEC14L1Q92503 715 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 SPAG5Q96R06 1193 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 PACSIN1Q9BY11 444 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
VPS33A-208ENST00000543633 ARMCX3Q9UH62 379 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-208ENST00000543633 NAGPAQ9UK23 515 aa15.01□□□□□ -0.01
VPS33A-208ENST00000543633 TTC7AQ9ULT0 858 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-208ENST00000543633 H0YGN5 161 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 CALUO43852 315 aaPredicted RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 PPP1R11O60927 126 aaPredicted RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 UCHL3P15374 230 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 NR2F2P24468 414 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 FNTAP49354 379 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 PTK2Q05397 1052 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 AP3B2Q13367 1082 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 CEP85LQ5SZL2 805 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 EPM2AIP1Q7L775 607 aaPredicted RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 ZNF571Q7Z3V5 609 aaPredicted RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 FMNL3Q8IVF7 1028 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 ERMNQ8TAM6 284 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 FGFBP2Q9BYJ0 223 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 KIAA1024Q9UPX6 916 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 DIS3Q9Y2L1 958 aaKnown RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 SAMM50Q9Y512 469 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 NFS1Q9Y697 457 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 E9PMD0 336 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 UFL1O94874 794 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 SSBP05455 408 aaKnown RBP eCLIP15□□□□□ -0.01
VPS33A-208ENST00000543633 PAEPP09466 180 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 HSD17B3P37058 310 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 PPP2R5EQ16537 467 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 EXOC3L4Q17RC7 722 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 ALKBH5Q6P6C2 394 aaKnown RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 LRRC47Q8N1G4 583 aaKnown RBP15□□□□□ -0.01
VPS33A-208ENST00000543633 PSTPIP2Q9H939 334 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 GGA1Q9UJY5 639 aa15□□□□□ -0.01
VPS33A-208ENST00000543633 POTEB3A0JP26 581 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 POTECB2RU33 542 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 AKR1B1P15121 316 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 ERCC3P19447 782 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 HNRNPH1P31943 449 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 JAM2P57087 298 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 GPSM2P81274 684 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 GUCY1A3Q02108 690 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CLUL1Q15846 466 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 NFIL3Q16649 462 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 KNOP1Q1ED39 458 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 MFSD14BQ5SR56 506 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 TTC19Q6DKK2 380 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 POTEBQ6S5H4 581 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CCDC26Q8TAB7 109 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CCT8L2Q96SF2 557 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 GPCPD1Q9NPB8 672 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 FAM114A2Q9NRY5 505 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 SLC12A6Q9UHW9 1150 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 NOC2LQ9Y3T9 749 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 NCANO14594 1321 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 KRT18P05783 430 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 H2AFZP0C0S5 128 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 XRCC5P13010 732 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 FERP16591 822 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 RPL13P26373 211 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 PON1P27169 355 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 EPHA7Q15375 998 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 DPP8Q6V1X1 898 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 H2AFVQ71UI9 128 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 GPIHBP1Q8IV16 184 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 KLHL7Q8IXQ5 586 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CABS1Q96KC9 395 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 ACTR5Q9H9F9 607 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 PACSIN2Q9UNF0 486 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-208ENST00000543633 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
VPS33A-208ENST00000543633 SART1O43290 800 aaKnown RBP14.98□□□□□ -0.01
VPS33A-208ENST00000543633 CEP104O60308 925 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms