RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 SLC26A2P50443 739 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 ADCY7P51828 1080 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 FUT2Q10981 343 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 RTN1Q16799 776 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 BMP2KLQ5H9B9 411 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 RTN4RL1Q86UN2 441 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 ANO3Q9BYT9 981 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 AGO4Q9HCK5 861 aaKnown RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 CLDND1Q9NY35 253 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-219ENST00000542848 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
PTPN6-219ENST00000542848 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 SMCO2A6NFE2 343 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 STXBP3O00186 592 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 GRM6O15303 877 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 STAG3L1P0CL83 205 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 LTBRP36941 435 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 SREBF1P36956 1147 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
PTPN6-219ENST00000542848 RCAN1P53805 252 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.25
PTPN6-219ENST00000542848 CTC1Q2NKJ3 1217 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 EP400NLQ6ZTU2 488 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 NIPA1Q7RTP0 329 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 CMTR2Q8IYT2 770 aaKnown RBP13.52□□□□□ -0.25
PTPN6-219ENST00000542848 LINC01599Q8WXQ3 324 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 P2RX5Q93086 422 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 BRPF3Q9ULD4 1205 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.25
PTPN6-219ENST00000542848 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 MMP1P03956 469 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 ZNF76P36508 570 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 KRT76Q01546 638 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 TMEM62Q0P6H9 643 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 KRT32Q14532 448 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
PTPN6-219ENST00000542848 COL1A2P08123 1366 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 FAM86C2PA6NEL3 165 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 GOLGA8AA7E2F4 631 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 GOLGA8BA8MQT2 603 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 HBP1O60381 514 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
PTPN6-219ENST00000542848 KLRC1P26715 233 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 HYAL1Q12794 435 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 PAK2Q13177 524 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 FAM160B1Q5W0V3 765 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
PTPN6-219ENST00000542848 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
PTPN6-219ENST00000542848 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
PTPN6-219ENST00000542848 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
PTPN6-219ENST00000542848 MRPL42Q9Y6G3 142 aaKnown RBP13.5□□□□□ -0.25
PTPN6-219ENST00000542848 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 BACH1O14867 736 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CCNE2O96020 404 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CYP3A4P08684 503 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 SCG2P13521 617 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CDC27P30260 824 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ZP2Q05996 745 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CAMK1Q14012 370 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 PFKFB3Q16875 520 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ZNF484Q5JVG2 852 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 PLA2G4DQ86XP0 818 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 SPPL3Q8TCT6 385 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
PTPN6-219ENST00000542848 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 LRFN2Q9ULH4 789 aa13.49□□□□□ -0.25
PTPN6-219ENST00000542848 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms