RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 MCM4P33991 863 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CCT6AP40227 531 aaKnown RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PSMC6P62333 389 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PTPN11Q06124 597 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CTTNQ14247 550 aaKnown RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PLCB4Q15147 1175 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 UGCGQ16739 394 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 ZNF484Q5JVG2 852 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 COL13A1Q5TAT6 717 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 C1orf53Q5VUE5 145 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PDXDC2PQ6P474 469 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 ANO5Q75V66 913 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 OTUD6AQ7L8S5 288 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 KCNK18Q7Z418 384 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 UBE2Q1Q7Z7E8 422 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 TPH2Q8IWU9 490 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 FMR1NBQ8N0W7 255 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 SYT2Q8N9I0 419 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 SNX29Q8TEQ0 813 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 LRRC15Q8TF66 581 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 ATP6V0A1Q93050 837 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CALML4Q96GE6 196 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 TIGD1Q96MW7 591 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PYM1Q9BRP8 204 aaKnown RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 MTG1Q9BT17 334 aaPredicted RBP6.57□□□□□ -1.36
ABCF1-207ENST00000542772 TMEM106CQ9BVX2 250 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CUEDC2Q9H467 287 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 AZI2Q9H6S1 392 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 BLOC1S4Q9NUP1 217 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 KBTBD4Q9NVX7 518 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 FAM13BQ9NYF5 915 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CCDC39Q9UFE4 941 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 USP25Q9UHP3 1055 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 KCNH3Q9ULD8 1083 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 KIAA1024Q9UPX6 916 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 PPME1Q9Y570 386 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 SCN10AQ9Y5Y9 1956 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 NRCAMQ92823 1304 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 IGKV6-21A0A0C4DH24 114 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 POTEB3A0JP26 581 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 GOLGA6L4A6NEF3 574 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 RRN3P2A6NIE6 340 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 ZBTB42B2RXF5 422 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 E9PMD0 336 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 POLR2DO15514 142 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 MAFO75444 373 aaPredicted RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 ZNF202O95125 648 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 EYA4O95677 639 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 TFRCP02786 760 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 OATP04181 439 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 MYL3P08590 195 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 INSRRP14616 1297 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 PFKFB1P16118 471 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 YWHABP31946 246 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 RARRES1P49788 294 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 PSEN2P49810 448 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 NDUFA8P51970 172 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 SLC12A3P55017 1021 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 MDM2Q00987 491 aaPredicted RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 SP4Q02446 784 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 CYP4A11Q02928 519 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 KARSQ15046 597 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 LONRF3Q496Y0 759 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 MARCH8Q5T0T0 291 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 UTP14CQ5TAP6 766 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 RRAGBQ5VZM2 374 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 CNNM4Q6P4Q7 775 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 NFRKBQ6P4R8 1299 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 POTEBQ6S5H4 581 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 CXCL17Q6UXB2 119 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 CCDC73Q6ZRK6 1079 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 EXOC8Q8IYI6 725 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 IQUBQ8NA54 791 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 ATP8B4Q8TF62 1192 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 MRPS27Q92552 414 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 GLG1Q92896 1179 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 FAM167AQ96KS9 214 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 LXNQ9BS40 222 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 KATNAL1Q9BW62 490 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 GOLPH3LQ9H4A5 285 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 DDX19AQ9NUU7 478 aaKnown RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 STK17AQ9UEE5 414 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 ZNF215Q9UL58 517 aaPredicted RBP6.56□□□□□ -1.36
ABCF1-207ENST00000542772 COL1A2P08123 1366 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 DNAH12Q6ZR08 3092 aa6.56□□□□□ -1.36
ABCF1-207ENST00000542772 KAT6AQ92794 2004 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 LOXHD1Q8IVV2 1947 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 A0A087WWV3 80 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 A0A1W2PQ45 241 aaPredicted RBP6.55□□□□□ -1.36
ABCF1-207ENST00000542772 A0A1W2PQY0 241 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 MBLAC1A4D2B0 266 aaPredicted RBP6.55□□□□□ -1.36
ABCF1-207ENST00000542772 DDX11L8A8MPP1 907 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 GOLGA6L22H0YM25 854 aa6.55□□□□□ -1.36
ABCF1-207ENST00000542772 ARVCFO00192 962 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms