RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 POTEBQ6S5H4 581 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 ABHD15Q6UXT9 468 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
VPS33A-206ENST00000542310 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 PHKBQ93100 1093 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 TM6SF1Q9BZW5 370 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 ZSWIM6Q9HCJ5 1215 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 TRPV2Q9Y5S1 764 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 EVPLQ92817 2033 aa17.77■□□□□ 0.43
VPS33A-206ENST00000542310 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.43
VPS33A-206ENST00000542310 TCF20Q9UGU0 1960 aaKnown RBP17.77■□□□□ 0.43
VPS33A-206ENST00000542310 SMIM35A0A1B0GVV1 85 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
VPS33A-206ENST00000542310 HBP1O60381 514 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 NEFLP07196 543 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
VPS33A-206ENST00000542310 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
VPS33A-206ENST00000542310 ATP8B4Q8TF62 1192 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 C17orf80Q9BSJ5 609 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 SLC26A6Q9BXS9 759 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 FTHL17Q9BXU8 183 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
VPS33A-206ENST00000542310 IGSF9BQ9UPX0 1349 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 KIAA1671Q9BY89 1806 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 BACH1O14867 736 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 KRT76Q01546 638 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-206ENST00000542310 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 CCDC60Q8IWA6 550 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-206ENST00000542310 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 NME8Q8N427 588 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 HLA-CQ95604 372 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 UHRF1Q96T88 793 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF577Q9BSK1 485 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-206ENST00000542310 RC3H2Q9HBD1 1191 aaKnown RBP17.75■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF302Q9NR11 478 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 RWDD3Q9Y3V2 267 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 CYP46A1Q9Y6A2 500 aa17.75■□□□□ 0.43
VPS33A-206ENST00000542310 ADGRA3Q8IWK6 1321 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
VPS33A-206ENST00000542310 TFF2Q03403 129 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 PTPROQ16827 1216 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 TIGD5Q53EQ6 642 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 MTHFD1LQ6UB35 978 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 MRPL38Q96DV4 380 aaKnown RBP17.74■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
VPS33A-206ENST00000542310 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
VPS33A-206ENST00000542310 H3BNC9 293 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 UPP2O95045 317 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 BMP1P13497 986 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 PDXDC2PQ6P474 469 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 LENG9Q96B70 501 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 AGO3Q9H9G7 860 aaKnown RBP17.73■□□□□ 0.43
VPS33A-206ENST00000542310 NCOA5Q9HCD5 579 aaKnown RBP17.73■□□□□ 0.43
VPS33A-206ENST00000542310 VPS54Q9P1Q0 977 aa17.73■□□□□ 0.43
VPS33A-206ENST00000542310 C5orf67F2Z3F1 127 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 DEXIO95424 95 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 CCT2P78371 535 aaKnown RBP17.72■□□□□ 0.43
VPS33A-206ENST00000542310 PAK2Q13177 524 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 PRR16Q569H4 304 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 TMEM192Q8IY95 271 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 FIBCD1Q8N539 461 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 BBXQ8WY36 941 aaPredicted RBP17.72■□□□□ 0.43
VPS33A-206ENST00000542310 ZBTB10Q96DT7 871 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 CELF4Q9BZC1 486 aaKnown RBP17.72■□□□□ 0.43
VPS33A-206ENST00000542310 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
VPS33A-206ENST00000542310 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
VPS33A-206ENST00000542310 RBAK-RBAKDNI3L0D1 243 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 ENPP3O14638 875 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 RB1P06400 928 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 PSAPP07602 524 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 KLRC1P26715 233 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 CD52P31358 61 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 USP11P51784 963 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 KCNQ1P51787 676 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
VPS33A-206ENST00000542310 CPLX2Q6PUV4 134 aaKnown RBP17.71■□□□□ 0.43
VPS33A-206ENST00000542310 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 DAGLBQ8NCG7 672 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 CLP1Q92989 425 aaKnown RBP17.71■□□□□ 0.43
VPS33A-206ENST00000542310 ZNF689Q96CS4 500 aaPredicted RBP17.71■□□□□ 0.43
VPS33A-206ENST00000542310 FAM167AQ96KS9 214 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 PCDHA10Q9Y5I2 948 aa17.71■□□□□ 0.43
VPS33A-206ENST00000542310 WDR64B1ANS9 1081 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 ZBTB42B2RXF5 422 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 CPLX1O14810 134 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 NLRP5P59047 1200 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms