RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 PCDHA2Q9Y5H9 948 aa17.64■□□□□ 0.41
RTN3-211ENST00000542238 STXBP3O00186 592 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 LINC01565O15544 149 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 TBX10O75333 385 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 ITGB1P05556 798 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 SCG2P13521 617 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 STAT5BP51692 787 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 PAN2Q504Q3 1202 aaKnown RBP17.63■□□□□ 0.41
RTN3-211ENST00000542238 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 TMTC3Q6ZXV5 915 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 RAB11FIP4Q86YS3 637 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 SPPL3Q8TCT6 385 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 MFSD14AQ96MC6 490 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 CELF4Q9BZC1 486 aaKnown RBP17.63■□□□□ 0.41
RTN3-211ENST00000542238 NFASCO94856 1347 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 IGSF9BQ9UPX0 1349 aa17.63■□□□□ 0.41
RTN3-211ENST00000542238 C5orf42Q9H799 3197 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 SMIM35A0A1B0GVV1 85 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 ACTR2P61160 394 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 KRT76Q01546 638 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 CAMK1Q14012 370 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
RTN3-211ENST00000542238 FAM43BQ6ZT52 329 aaPredicted RBP17.62■□□□□ 0.41
RTN3-211ENST00000542238 RNF135Q8IUD6 432 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 CRIPAKQ8N1N5 446 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 KLHL23Q8NBE8 558 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
RTN3-211ENST00000542238 MUTYHQ9UIF7 546 aa17.62■□□□□ 0.41
RTN3-211ENST00000542238 SLC27A2O14975 620 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 FOSP01100 380 aaPredicted RBP17.61■□□□□ 0.41
RTN3-211ENST00000542238 DNAJB1P25685 340 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 SLC26A2P50443 739 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 NAPAP54920 295 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 MTHFD1LQ6UB35 978 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 HFE2Q6ZVN8 426 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 EFHBQ8N7U6 833 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 POF1BQ8WVV4 589 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 FBXL18Q96ME1 805 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 KDM3AQ9Y4C1 1321 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 PLXNA4Q9HCM2 1894 aa17.61■□□□□ 0.41
RTN3-211ENST00000542238 EVPLQ92817 2033 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 ZNF318Q5VUA4 2279 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 EYA4O95677 639 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
RTN3-211ENST00000542238 NHLH1Q02575 133 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 NFX1Q12986 1120 aaKnown RBP17.6■□□□□ 0.41
RTN3-211ENST00000542238 CEP55Q53EZ4 464 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 ODR4Q5SWX8 454 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
RTN3-211ENST00000542238 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 MSLNLQ96KJ4 702 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 LSG1Q9H089 658 aaKnown RBP17.6■□□□□ 0.41
RTN3-211ENST00000542238 RIC8AQ9NPQ8 531 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 PCDHB7Q9Y5E2 793 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 PCDHB12Q9Y5F1 795 aa17.6■□□□□ 0.41
RTN3-211ENST00000542238 FNDC1Q4ZHG4 1894 aaPredicted RBP17.59■□□□□ 0.41
RTN3-211ENST00000542238 BACH1O14867 736 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 ARP10275 920 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 KLRC1P26715 233 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 ZNF76P36508 570 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 NRIP1P48552 1158 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
RTN3-211ENST00000542238 MRE11P49959 708 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 ADCY7P51828 1080 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 COASYQ13057 564 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 ADGRD2Q7Z7M1 963 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 RBM23Q86U06 439 aaKnown RBP17.59■□□□□ 0.41
RTN3-211ENST00000542238 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 EDAQ92838 391 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 AGO4Q9HCK5 861 aaKnown RBP17.59■□□□□ 0.41
RTN3-211ENST00000542238 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
RTN3-211ENST00000542238 GINS2Q9Y248 185 aa17.59■□□□□ 0.41
RTN3-211ENST00000542238 TRIOO75962 3097 aa17.58■□□□□ 0.41
RTN3-211ENST00000542238 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 HBP1O60381 514 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 RPS6KA5O75582 802 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 ATG7O95352 703 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 UBE3AQ05086 875 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.4
RTN3-211ENST00000542238 TMEM266Q2M3C6 531 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 PGBD1Q96JS3 809 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 ANO3Q9BYT9 981 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 TLE6Q9H808 572 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 C1orf112Q9NSG2 853 aa17.58■□□□□ 0.4
RTN3-211ENST00000542238 CLEC1BQ9P126 229 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms