RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 DNAJC17Q9NVM6 304 aaKnown RBP16.47■□□□□ 0.23
VARS2-211ENST00000541562 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CASZ1Q86V15 1759 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 FGFR1OPO95684 399 aaKnown RBP16.46■□□□□ 0.23
VARS2-211ENST00000541562 GIT2Q14161 759 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
VARS2-211ENST00000541562 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.23
VARS2-211ENST00000541562 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
VARS2-211ENST00000541562 AMACRQ9UHK6 382 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 NHSL1Q5SYE7 1610 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 ARP10275 920 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 SEC24CP53992 1094 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 TAS2R14Q9NYV8 317 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
VARS2-211ENST00000541562 ODF2Q5BJF6 829 aa16.46■□□□□ 0.22
VARS2-211ENST00000541562 ALKBH5Q6P6C2 394 aaKnown RBP16.46■□□□□ 0.22
VARS2-211ENST00000541562 BTBD6Q96KE9 485 aa16.46■□□□□ 0.22
VARS2-211ENST00000541562 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.22
VARS2-211ENST00000541562 ACBD3Q9H3P7 528 aa16.46■□□□□ 0.22
VARS2-211ENST00000541562 GAKO14976 1311 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 PVALEFA0A1B0GWK0 134 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 PEX10O60683 326 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 BMP3P12645 472 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 LRCH2Q5VUJ6 765 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 FAM76AQ8TAV0 307 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 BCAS4Q8TDM0 211 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 WRAP73Q9P2S5 460 aaPredicted RBP16.45■□□□□ 0.22
VARS2-211ENST00000541562 RAD51CO43502 376 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 NR3C1P04150 777 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 UCHL3P15374 230 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 HOXD13P35453 343 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 GPATCH4Q5T3I0 446 aaKnown RBP16.45■□□□□ 0.22
VARS2-211ENST00000541562 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 UBLCP1Q8WVY7 318 aaPredicted RBP16.45■□□□□ 0.22
VARS2-211ENST00000541562 ZIM3Q96PE6 472 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 PPANQ9NQ55 473 aaKnown RBP16.45■□□□□ 0.22
VARS2-211ENST00000541562 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 NR2E1Q9Y466 385 aa16.45■□□□□ 0.22
VARS2-211ENST00000541562 LRRC63Q05C16 580 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 ADCY1Q08828 1119 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 KAT5Q92993 513 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 EXOC4Q96A65 974 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 FAM118BQ9BPY3 351 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 GJC1P36383 396 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 FLT3P36888 993 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 TMEM119Q4V9L6 283 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 LMBRD2Q68DH5 695 aaPredicted RBP16.44■□□□□ 0.22
VARS2-211ENST00000541562 TRIM51Q9BSJ1 452 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 LRRC4CQ9HCJ2 640 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 STIM2Q9P246 746 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 FECHP22830 423 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 CDR1P51861 262 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
VARS2-211ENST00000541562 GRID2IPA4D2P6 1211 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 GAS7O60861 476 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 DLG4P78352 724 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 RPS6KA1Q15418 735 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 CFAP221Q4G0U5 840 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
VARS2-211ENST00000541562 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 EXOC3O60645 756 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 PDIA5Q14554 519 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 WDR18Q9BV38 432 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 HSF2BPO75031 334 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 ALAS1P13196 640 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 PON1P27169 355 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 GCLMP48507 274 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
VARS2-211ENST00000541562 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 PEX26Q7Z412 305 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 CASKIN2Q8WXE0 1202 aa16.43■□□□□ 0.22
VARS2-211ENST00000541562 SERPING1P05155 500 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 KRT13P13646 458 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
VARS2-211ENST00000541562 SLC12A3P55017 1021 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 MYL1P05976 194 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 CBWD6Q4V339 395 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 CBWD3Q5JTY5 395 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 CBWD5Q5RIA9 395 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 HNRNPLLQ8WVV9 542 aaKnown RBP16.42■□□□□ 0.22
VARS2-211ENST00000541562 ZNF668Q96K58 619 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms