RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 ITGB3BPQ13352 177 aaPredicted RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 PODNQ7Z5L7 613 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 RIOX1Q9H6W3 641 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 FER1L6Q2WGJ9 1857 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 DDX60LQ5H9U9 1706 aaKnown RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 E9PMD0 336 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 MYBP10242 640 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 ACTN1P12814 892 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 HSPA9P38646 679 aaKnown RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TNNC1P63316 161 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 ASIC2Q16515 512 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 RNF187Q5TA31 235 aaPredicted RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TEX2Q8IWB9 1127 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 MYCBPAPQ8TBZ2 947 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TAF4BQ92750 862 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 HAS1Q92839 578 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TAF1DQ9H5J8 278 aaPredicted RBP11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TMBIM4Q9HC24 238 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
PHACTR3-209ENST00000541461 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 HMGB1P1B2RPK0 211 aaPredicted RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 E7EVH7 732 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 H0YHG0 523 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 CLSTN1O94985 981 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 PDHBP11177 359 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 SMARCA1P28370 1054 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 ECHS1P30084 290 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 HSD17B3P37058 310 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 TEX11Q8IYF3 940 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 CEP63Q96MT8 703 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 GANQ9H2C0 597 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 YY1AP1Q9H869 796 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 PPANQ9NQ55 473 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 CEP104O60308 925 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 MARCH6O60337 910 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 FSBPO95073 299 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 SCNN1DP51172 638 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 PTK2Q05397 1052 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 ADAM9Q13443 819 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 UAP1Q16222 522 aaPredicted RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 VPS33BQ9H267 617 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 NEUROG2Q9H2A3 272 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 DDX25Q9UHL0 483 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
PHACTR3-209ENST00000541461 ATXN2Q99700 1313 aaKnown RBP11.52□□□□□ -0.56
PHACTR3-209ENST00000541461 KIF4AO95239 1232 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 LDHCP07864 332 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 SLC9A1P19634 815 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 EPS15P42566 896 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 IFT88Q13099 833 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 GPR162Q16538 588 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 HERC4Q5GLZ8 1057 aaPredicted RBP11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 FOXR2Q6PJQ5 311 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 SPATS2Q86XZ4 545 aaKnown RBP11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 CLEC10AQ8IUN9 316 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 KCTD10Q9H3F6 313 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 PLCB1Q9NQ66 1216 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 KIAA1024Q9UPX6 916 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 H0YGN5 161 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 FLT3P36888 993 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 MICALCLQ6ZW33 695 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 IRF2BP2Q7Z5L9 587 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 NIM1KQ8IY84 436 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 JDP2Q8WYK2 163 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 PAGR1Q9BTK6 254 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 ZHX3Q9H4I2 956 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 EMILIN3Q9NT22 766 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 NFS1Q9Y697 457 aa11.52□□□□□ -0.57
PHACTR3-209ENST00000541461 GOLGA6L10A6NI86 522 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 GCOM1H8Y6P7 765 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 PPP1R11O60927 126 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 GNA14O95837 355 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 FAM107AO95990 144 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 PLA2G4BP0C869 781 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms