RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TSHZ1Q6ZSZ6 1077 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 NME8Q8N427 588 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 LENG9Q96B70 501 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 RC3H2Q9HBD1 1191 aaKnown RBP14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 COG5Q9UP83 839 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 MAFBQ9Y5Q3 323 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 CDY2AQ9Y6F7 541 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 ATG2AQ2TAZ0 1938 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 BRWD1Q9NSI6 2320 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 POTEB3A0JP26 581 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 HBP1O60381 514 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 GHRP10912 638 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 ATP4AP20648 1035 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 USP11P51784 963 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 AKAP17AQ02040 695 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 ZNF746Q6NUN9 644 aaPredicted RBP14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 FAM117BQ6P1L5 589 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 POTEBQ6S5H4 581 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 CCDC148Q8NFR7 591 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 ATP8B4Q8TF62 1192 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 C17orf80Q9BSJ5 609 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 SLC26A6Q9BXS9 759 aa14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 AGO3Q9H9G7 860 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-223ENST00000540475 ZBTB42B2RXF5 422 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 M0R2N6 131 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 IGBP1P78318 339 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 ZNF484Q5JVG2 852 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 MIS18BP1Q6P0N0 1132 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 MTHFD1LQ6UB35 978 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 GDPD5Q8WTR4 605 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 ZNF689Q96CS4 500 aaPredicted RBP14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 ZBTB10Q96DT7 871 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 IL17RAQ96F46 866 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 ZNF577Q9BSK1 485 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 NCOA5Q9HCD5 579 aaKnown RBP14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 IGSF9BQ9UPX0 1349 aa14.89□□□□□ -0.03
SEMA4D-223ENST00000540475 KIAA1671Q9BY89 1806 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 CYP3A7-CYP3A51PA0A087WV96 503 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 C5orf67F2Z3F1 127 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 H3BNC9 293 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 CYP3A7P24462 503 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 KRT76Q01546 638 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 EPC2Q52LR7 807 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 RTN4RL1Q86UN2 441 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 TRAPPC12Q8WVT3 735 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 YME1L1Q96TA2 773 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 FTHL17Q9BXU8 183 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 CELF4Q9BZC1 486 aaKnown RBP14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 ZNF302Q9NR11 478 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 TRPV2Q9Y5S1 764 aa14.88□□□□□ -0.03
SEMA4D-223ENST00000540475 FNDC1Q4ZHG4 1894 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 TNFRSF10AO00220 468 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 UPP2O95045 317 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 DEXIO95424 95 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 KLRC1P26715 233 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 TFF2Q03403 129 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 SSRP1Q08945 709 aaKnown RBP14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 NPY5RQ15761 445 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 GALNT17Q6IS24 598 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 SWSAP1Q6NVH7 229 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 PDXDC2PQ6P474 469 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 KIAA0319LQ8IZA0 1049 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 DAGLBQ8NCG7 672 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 RASGRP4Q8TDF6 673 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 LINC01599Q8WXQ3 324 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 CLP1Q92989 425 aaKnown RBP14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 MBOAT7Q96N66 472 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 RIT2Q99578 217 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 C22orf23Q9BZE7 217 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 MTUS1Q9ULD2 1270 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 PADI3Q9ULW8 664 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 PCDHA4Q9UN74 947 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 PCDHA10Q9Y5I2 948 aa14.87□□□□□ -0.03
SEMA4D-223ENST00000540475 DDX39AO00148 427 aaKnown RBP14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 DGKIO75912 1065 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 RB1P06400 928 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 CD52P31358 61 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 ANAPC15P60006 121 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 Q4G0T1 1027 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 PRR16Q569H4 304 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 B3GNT9Q6UX72 402 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 ADAMTS19Q8TE59 1207 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 SLC5A5Q92911 643 aa14.86□□□□□ -0.03
SEMA4D-223ENST00000540475 HLA-CQ95604 372 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms