RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PICK1Q9NRD5 415 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 INIPQ9NRY2 104 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 RHBDL2Q9NX52 303 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 GIN1Q9NXP7 522 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 EURLQ9NYK6 297 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ZMAT5Q9UDW3 170 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 LIMA1Q9UHB6 759 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 DMGDHQ9UI17 866 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 CCPG1Q9ULG6 757 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ARL2BPQ9Y2Y0 163 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 TSPOAP1O95153 1857 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ARHGAP10A1A4S6 786 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SH3PXD2BA1X283 911 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 FAM25EA8MYX2 175 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SH2B2O14492 632 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NDC80O14777 642 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 HNRNPRO43390 633 aaKnown RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 UBOX5O94941 541 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ABL1P00519 1130 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NUDT17P0C025 328 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 FOSL1P15407 271 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF12P17014 697 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ENDOUP21128 410 aaKnown RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ERVK-24P63145 666 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 KCNJ2P63252 427 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 TNNC1P63316 161 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF844Q08AG5 666 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 MSLNQ13421 630 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 GRM2Q14416 872 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ADCK5Q3MIX3 580 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 CFAP221Q4G0U5 840 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 RESP18Q5W5W9 173 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 PCNX4Q63HM2 1172 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 DENND2CQ68D51 928 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 KCTD16Q68DU8 428 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NXNQ6DKJ4 435 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SLC2A7Q6PXP3 512 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 DTHD1Q6ZMT9 781 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 MAMSTRQ6ZN01 415 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 TMTC3Q6ZXV5 915 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 PPP1R42Q7Z4L9 355 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF804AQ7Z570 1209 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 DAAM2Q86T65 1068 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 PATL1Q86TB9 770 aaKnown RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SFR1Q86XK3 245 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 UNC5CLQ8IV45 518 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 RHOT2Q8IXI1 618 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SPICE1Q8N0Z3 855 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NKX2-3Q8TAU0 364 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 TBC1D16Q8TBP0 767 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF274Q96GC6 653 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ANKRD36BP1Q96IX9 119 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 BIRC8Q96P09 236 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 DCBLD2Q96PD2 775 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NUDCD1Q96RS6 583 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF184Q99676 751 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SLC39A3Q9BRY0 314 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 LRRC1Q9BTT6 524 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 FHDC1Q9C0D6 1143 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 DRC3Q9H069 523 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 RPAP3Q9H6T3 665 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 PIH1D3Q9NQM4 214 aaKnown RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 FKBP14Q9NWM8 211 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NMRK1Q9NWW6 199 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ZDHHC7Q9NXF8 308 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 STK32BQ9NY57 414 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 UBAP1Q9NZ09 502 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 C6orf203Q9P0P8 240 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 PLAAQ9Y263 795 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 HBS1LQ9Y450 684 aaKnown RBP6.64□□□□□ -1.35
SNHG1-211ENST00000539921 ATP8B3O60423 1300 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 NFAT5O94916 1531 aa6.64□□□□□ -1.35
SNHG1-211ENST00000539921 TNFRSF10AO00220 468 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 PDE2AO00408 941 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 PIK3C2AO00443 1686 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 KMOO15229 486 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 CTNND1O60716 968 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 SUPT3HO75486 399 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 PDE5AO76074 875 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 BAIAP3O94812 1187 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 LCA5LO95447 670 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 AGTP01019 485 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 LYNP07948 512 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 IDEP14735 1019 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 IARSP41252 1262 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 TXKP42681 527 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ACADSBP45954 432 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF132P52740 706 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 EMP3P54852 163 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 RNASELQ05823 741 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 AP1B1Q10567 949 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 HNRNPDQ14103 355 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 RCN2Q14257 317 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 KIF22Q14807 665 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms