RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CAPN7Q9Y6W3 813 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 C10orf71Q711Q0 1435 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 SRCAPQ6ZRS2 3230 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 POTECB2RU33 542 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 PGRMC1O00264 195 aaKnown RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 KRT18P05783 430 aaKnown RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 PON1P27169 355 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 BIRC3Q13489 604 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 UAP1Q16222 522 aaPredicted RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 GPATCH4Q5T3I0 446 aaKnown RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 C6orf89Q6UWU4 347 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 RUFY4Q6ZNE9 571 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 TBC1D22AQ8WUA7 517 aa10.57□□□□□ -0.72
CDH13-204ENST00000539548 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
CDH13-204ENST00000539548 PDXKO00764 312 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 MED24O75448 989 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 FLOT1O75955 427 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 UFL1O94874 794 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 SEC24CP53992 1094 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 NPEPPSP55786 919 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 MTMR3Q13615 1198 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 EPHA7Q15375 998 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 EXOC3L4Q17RC7 722 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 KNOP1Q1ED39 458 aaKnown RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 AGBL2Q5U5Z8 902 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 KCNV1Q6PIU1 500 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 EPM2AIP1Q7L775 607 aaPredicted RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 MXD3Q9BW11 206 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 SLITRK6Q9H5Y7 841 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 MYO3BQ8WXR4 1341 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 H2AFZP0C0S5 128 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 HOXD13P35453 343 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 JAM2P57087 298 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 DRP2Q13474 957 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 GIT2Q14161 759 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 MOXD1Q6UVY6 613 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 H2AFVQ71UI9 128 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 RBM46Q8TBY0 533 aaKnown RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 SEC14L1Q92503 715 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 METTL14Q9HCE5 456 aaKnown RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 GGA1Q9UJY5 639 aa10.56□□□□□ -0.72
CDH13-204ENST00000539548 NOC2LQ9Y3T9 749 aaKnown RBP10.56□□□□□ -0.72
CDH13-204ENST00000539548 GMNCA6NCL1 334 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 E7EVH7 732 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 KRIT1O00522 736 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 CALUO43852 315 aaPredicted RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 XRCC5P13010 732 aaKnown RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 CTNNA1P35221 906 aaKnown RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 CASP5P51878 434 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 HDLBPQ00341 1268 aaKnown RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH13-204ENST00000539548 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 SYT2Q8N9I0 419 aaPredicted RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 CCDC26Q8TAB7 109 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 CABS1Q96KC9 395 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 AP1M1Q9BXS5 423 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 NEUROG2Q9H2A3 272 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 ZHX3Q9H4I2 956 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 SIX2Q9NPC8 291 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 SLC12A6Q9UHW9 1150 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 DAGLAQ9Y4D2 1042 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 AFF2P51816 1311 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 H0YHG0 523 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 MYO1FO00160 1098 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 GFPT2O94808 682 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 HPDP32754 393 aaPredicted RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 SLC16A2P36021 539 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 ACTN3Q08043 901 aaPredicted RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 DDR1Q08345 913 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 NT5DC3Q86UY8 548 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 CATSPER3Q86XQ3 398 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 HES6Q96HZ4 224 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 GOLPH3Q9H4A6 298 aa10.55□□□□□ -0.72
CDH13-204ENST00000539548 TTC7AQ9ULT0 858 aaPredicted RBP10.55□□□□□ -0.72
CDH13-204ENST00000539548 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
CDH13-204ENST00000539548 GTPBP10A4D1E9 387 aaKnown RBP10.54□□□□□ -0.72
CDH13-204ENST00000539548 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
CDH13-204ENST00000539548 TMCO5BA8MYB1 307 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms