RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PCDHA11Q9Y5I1 949 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SPO11Q9Y5K1 396 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 B3GALT1Q9Y5Z6 326 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ITIH6Q6UXX5 1313 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 C7orf72A4D263 438 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FAM171A2A8MVW0 826 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ISM1B1AKI9 464 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 C1QTNF9BB2RNN3 333 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 MSTNO14793 375 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 EIF5BO60841 1220 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SEMA7AO75326 666 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ESR1P03372 595 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CELA3BP08861 270 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 COL6A2P12110 1019 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 OSMP13725 252 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TRIM27P14373 513 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SLC9A1P19634 815 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 MAP4P27816 1152 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 STAT5AP42229 794 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ECE1P42892 770 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FOXO1Q12778 655 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NMIQ13287 307 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SURF1Q15526 300 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 GFOD2Q3B7J2 385 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FAM102BQ5T8I3 360 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FDX2Q6P4F2 183 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TOGARAM2Q6ZUX3 1019 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SLCO6A1Q86UG4 719 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NOSTRINQ8IVI9 506 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 COLGALT2Q8IYK4 626 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TTLL6Q8N841 843 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 GLB1L3Q8NCI6 653 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TTC8Q8TAM2 541 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CASKIN2Q8WXE0 1202 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LIN37Q96GY3 246 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 KCNJ15Q99712 375 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 DPH1Q9BZG8 443 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 GAR1Q9NY12 217 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SAMD15Q9P1V8 674 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LRP2BPQ9P2M1 347 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 USP21Q9UK80 565 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 POLHQ9Y253 713 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PITPNM2Q9BZ72 1349 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 C9orf118A6NHY6 69 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF561-AS1K7EIQ3 104 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 OPA1O60313 960 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SPINK2P20155 84 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TACR1P25103 407 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SERPINB3P29508 390 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NEK2P51955 445 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 RPL11P62913 178 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 AMPD2Q01433 879 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TEKQ02763 1124 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 GAGE13Q4V321 117 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FAM26FQ5R3K3 315 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ZBTB41Q5SVQ8 909 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CDCA2Q69YH5 1023 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LILRA6Q6PI73 481 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LMBR1LQ6UX01 489 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 BEND4Q6ZU67 534 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SPRED2Q7Z698 418 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 DCP2Q8IU60 420 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PEX11GQ96HA9 241 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TBATAQ96M53 351 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 HSPA12BQ96MM6 686 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PTCHD1Q96NR3 888 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NT5C1BQ96P26 610 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM60Q9H2L4 133 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NELFAQ9H3P2 528 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 C7orf69Q9H7B7 122 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 KCNK12Q9HB15 430 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PIDD1Q9HB75 910 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PICK1Q9NRD5 415 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TPSG1Q9NRR2 321 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 THG1LQ9NWX6 298 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 BTG4Q9NY30 223 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 LOC102724159A0A0B4J2E5 919 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 C2orf71A6NGG8 1288 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PRR19A6NJB7 356 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 VSTM5A8MXK1 200 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 E7ENX8 843 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 COBLO75128 1261 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CHEK2O96017 543 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 GASTP01350 101 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ASGR2P07307 311 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CLEC2LP0C7M8 214 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 HSPA6P17066 643 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TRHRP34981 398 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 AFMP43652 599 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 RECQLP46063 649 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 GPR3P46089 330 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NEK4P51957 841 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SLC5A3P53794 718 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TAP2Q03519 686 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 GRM3Q14832 879 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PWP2Q15269 919 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM177Q53S58 311 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 UBXN11Q5T124 520 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ANGEL2Q5VTE6 544 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms