RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ZBTB5O15062 677 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 SMIM24O75264 130 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
SCARB1-205ENST00000538291 RRAGDQ9NQL2 400 aaPredicted RBP18.1■□□□□ 0.49
SCARB1-205ENST00000538291 ATP8A1Q9Y2Q0 1164 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 ABCA8O94911 1581 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
SCARB1-205ENST00000538291 KIAA1586Q9HCI6 787 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 TBC1D22BQ9NU19 505 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 LLGL1Q15334 1064 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 PAGE5Q96GU1 130 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 CLDN3O15551 220 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 FTCDO95954 541 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 ECE2O60344 883 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 ADRA2BP18089 450 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 SLMAPQ14BN4 828 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 TDRD3Q9H7E2 651 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 NGRNQ9NPE2 291 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 VPS39Q96JC1 886 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 ABCF3Q9NUQ8 709 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 SASH1O94885 1247 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 HOXD10P28358 340 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 KCTD16Q68DU8 428 aa18.09■□□□□ 0.49
SCARB1-205ENST00000538291 PRPF38AQ8NAV1 312 aaKnown RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 NHEJ1Q9H9Q4 299 aaPredicted RBP18.09■□□□□ 0.49
SCARB1-205ENST00000538291 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.49
SCARB1-205ENST00000538291 PPFIA2O75334 1257 aa18.08■□□□□ 0.49
SCARB1-205ENST00000538291 PSMA2P25787 234 aa18.08■□□□□ 0.49
SCARB1-205ENST00000538291 SESN3P58005 492 aa18.08■□□□□ 0.49
SCARB1-205ENST00000538291 APOBEC3FQ8IUX4 373 aaKnown RBP18.08■□□□□ 0.49
SCARB1-205ENST00000538291 RAVER2Q9HCJ3 691 aaKnown RBP18.08■□□□□ 0.49
SCARB1-205ENST00000538291 DENND3A2RUS2 1198 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 STK25O00506 426 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 GSTA4O15217 222 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 TSPY1Q01534 308 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 BBS9Q3SYG4 887 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 KLC3Q6P597 504 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 ORC6Q9Y5N6 252 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 CHEK2O96017 543 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 PRELPP51888 382 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 KRT76Q01546 638 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 CDO1Q16878 200 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 PDIK1LQ8N165 341 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 HUS1O60921 280 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 MOCS3O95396 460 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 MCAMP43121 646 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 CDR2Q01850 454 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 CCDC197Q8NCU1 140 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 STAG1Q8WVM7 1258 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 FIS1Q9Y3D6 152 aa18.08■□□□□ 0.48
SCARB1-205ENST00000538291 USP17L10C9JJH3 530 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 GOLGA8FQ08AF8 430 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 GOLGA8DPQ0D2H9 430 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 SAMSN1Q9NSI8 373 aaKnown RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 ADCY1Q08828 1119 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 C11orf57Q6ZUT1 292 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 RHOT2Q8IXI1 618 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 DEPDC1BQ8WUY9 529 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■■■■□ 22.7
SCARB1-205ENST00000538291 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 DPYSL4O14531 572 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 INPP1P49441 399 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 SRRM1Q8IYB3 904 aaKnown RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 PPWD1Q96BP3 646 aaKnown RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 CFAP36Q96G28 342 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 CD209Q9NNX6 404 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 DHX9Q08211 1270 aaKnown RBP18.07■□□□□ 0.48
SCARB1-205ENST00000538291 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 HLFQ16534 295 aa18.07■□□□□ 0.48
SCARB1-205ENST00000538291 TOM1L1O75674 476 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 RWDD2BP57060 319 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCARB1-205ENST00000538291 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ANKRD20A4Q4UJ75 823 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ANKRD20A2Q5SQ80 823 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ANKRD20A1Q5TYW2 823 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 TRIM68Q6AZZ1 485 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ZWILCHQ9H900 591 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 RNF146Q9NTX7 359 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 SLC13A4Q9UKG4 626 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ABCB11O95342 1321 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 SFI1A8K8P3 1242 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 CLTAP09496 248 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 FASTKD5Q7L8L6 764 aaKnown RBP18.06■□□□□ 0.48
SCARB1-205ENST00000538291 SCN4BQ8IWT1 228 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 BEST2Q8NFU1 509 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 HSPH1Q92598 858 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 EFHD1Q9BUP0 239 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms