RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PLCB4Q15147 1175 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 EPC2Q52LR7 807 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 FBXO47Q5MNV8 452 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 JAKMIP3Q5VZ66 844 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 MIS18BP1Q6P0N0 1132 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 NME8Q8N427 588 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 FIBCD1Q8N539 461 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 MRPL38Q96DV4 380 aaKnown RBP14.92□□□□□ -0.02
RTN3-207ENST00000536011 PCYT2Q99447 389 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 RNF26Q9BY78 433 aaPredicted RBP14.92□□□□□ -0.02
RTN3-207ENST00000536011 TBC1D22BQ9NU19 505 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 TMEM260Q9NX78 707 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 PCDHA2Q9Y5H9 948 aa14.92□□□□□ -0.02
RTN3-207ENST00000536011 COL1A2P08123 1366 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 HBP1O60381 514 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 ATG7O95352 703 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 CPA1P15085 419 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 KCNQ1P51787 676 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 TMEM192Q8IY95 271 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 ZNF577Q9BSK1 485 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 TRPV2Q9Y5S1 764 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 ADGRA3Q8IWK6 1321 aa14.91□□□□□ -0.02
RTN3-207ENST00000536011 IGKV6D-21A0A0A0MT36 114 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 SMIM35A0A1B0GVV1 85 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 FAM86B1E9PN63 330 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 H3BNC9 293 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 DDX39AO00148 427 aaKnown RBP14.9□□□□□ -0.02
RTN3-207ENST00000536011 FAM86B2P0C5J1 330 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
RTN3-207ENST00000536011 KRT76Q01546 638 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 PAK2Q13177 524 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 GPM6BQ13491 265 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 ODR4Q5SWX8 454 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 ZNF746Q6NUN9 644 aaPredicted RBP14.9□□□□□ -0.02
RTN3-207ENST00000536011 PDXDC2PQ6P474 469 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
RTN3-207ENST00000536011 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 C11orf84Q9BUA3 381 aaPredicted RBP14.9□□□□□ -0.02
RTN3-207ENST00000536011 OSBPL7Q9BZF2 842 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 ZNF302Q9NR11 478 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 RALGAPA2Q2PPJ7 1873 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 IGSF9BQ9UPX0 1349 aa14.9□□□□□ -0.02
RTN3-207ENST00000536011 IGLV3-22A0A075B6J6 115 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 ENPP3O14638 875 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CCNE2O96020 404 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 RB1P06400 928 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 NEFLP07196 543 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 IFNAR1P17181 557 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CD52P31358 61 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CTNNB1P35222 781 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 ZNF484Q5JVG2 852 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 MTHFD1LQ6UB35 978 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CKAP2LQ8IYA6 745 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CRYGNQ8WXF5 182 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 PHKBQ93100 1093 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 CELF4Q9BZC1 486 aaKnown RBP14.89□□□□□ -0.03
RTN3-207ENST00000536011 UBE2ZQ9H832 354 aaPredicted RBP14.89□□□□□ -0.03
RTN3-207ENST00000536011 KDM3AQ9Y4C1 1321 aa14.89□□□□□ -0.03
RTN3-207ENST00000536011 PSAPP07602 524 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 STAG3L1P0CL83 205 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 EVCP57679 992 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 BTG3Q14201 252 aaPredicted RBP14.88□□□□□ -0.03
RTN3-207ENST00000536011 PKN1Q16512 942 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 CPLX2Q6PUV4 134 aaKnown RBP14.88□□□□□ -0.03
RTN3-207ENST00000536011 RUFY3Q7L099 469 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 NPAS4Q8IUM7 802 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 CCDC60Q8IWA6 550 aaPredicted RBP14.88□□□□□ -0.03
RTN3-207ENST00000536011 BANK1Q8NDB2 785 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 TRAPPC12Q8WVT3 735 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 FAM167AQ96KS9 214 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 C22orf23Q9BZE7 217 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 LMAN2LQ9H0V9 348 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 SH3GLB2Q9NR46 395 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 CEP131Q9UPN4 1083 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
RTN3-207ENST00000536011 C5orf67F2Z3F1 127 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 CPLX1O14810 134 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 DHX15O43143 795 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 NCK2O43639 380 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 KLRC1P26715 233 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 PDIA3P30101 505 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 CIITAP33076 1130 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 PUS10Q3MIT2 529 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 PRR16Q569H4 304 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 SWSAP1Q6NVH7 229 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 FAM177A1Q8N128 213 aaPredicted RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 CLP1Q92989 425 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 PLVAPQ9BX97 442 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 C1QTNF1Q9BXJ1 281 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 NSUN3Q9H649 340 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 AGO3Q9H9G7 860 aaKnown RBP14.87□□□□□ -0.03
RTN3-207ENST00000536011 PADI3Q9ULW8 664 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms