RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 CDC45O75419 566 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 ATG7O95352 703 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 RPLP2P05387 115 aaKnown RBP23.47■■□□□ 1.35
LTBR-205ENST00000535739 RB1P06400 928 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 CPA1P15085 419 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 ADD1P35611 737 aaKnown RBP23.47■■□□□ 1.35
LTBR-205ENST00000535739 ZNF76P36508 570 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 BTG3Q14201 252 aaPredicted RBP23.47■■□□□ 1.35
LTBR-205ENST00000535739 JAKMIP3Q5VZ66 844 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 POTEBQ6S5H4 581 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 EP400NLQ6ZTU2 488 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 CLP1Q92989 425 aaKnown RBP23.47■■□□□ 1.35
LTBR-205ENST00000535739 LRFN3Q9BTN0 628 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 GRXCR2A6NFK2 248 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 GRM6O15303 877 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 DGKIO75912 1065 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 CCNE2O96020 404 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 PABPC5Q96DU9 382 aaKnown RBP23.46■■□□□ 1.35
LTBR-205ENST00000535739 UIMC1Q96RL1 719 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 C11orf84Q9BUA3 381 aaPredicted RBP23.46■■□□□ 1.35
LTBR-205ENST00000535739 GLT8D2Q9H1C3 349 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 PADI3Q9ULW8 664 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 RWDD3Q9Y3V2 267 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 SQORQ9Y6N5 450 aa23.46■■□□□ 1.35
LTBR-205ENST00000535739 IGSF9BQ9UPX0 1349 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 IGKV6D-21A0A0A0MT36 114 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 FAM86B1E9PN63 330 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 ADAMTS3O15072 1205 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 FAM86B2P0C5J1 330 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 FGD1P98174 961 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 APOBRQ0VD83 1088 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 PFKFB3Q16875 520 aaPredicted RBP23.45■■□□□ 1.34
LTBR-205ENST00000535739 MTHFD1LQ6UB35 978 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 NIPA1Q7RTP0 329 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 CELF4Q9BZC1 486 aaKnown RBP23.45■■□□□ 1.34
LTBR-205ENST00000535739 WDR81Q562E7 1941 aa23.45■■□□□ 1.34
LTBR-205ENST00000535739 SMIM35A0A1B0GVV1 85 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 BACH1O14867 736 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 HMGB1P09429 215 aaKnown RBP23.44■■□□□ 1.34
LTBR-205ENST00000535739 METAP2P50579 478 aaKnown RBP eCLIP23.44■■□□□ 1.34
LTBR-205ENST00000535739 RCAN1P53805 252 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 COL19A1Q14993 1142 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 ABHD15Q6UXT9 468 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 PLA2G4DQ86XP0 818 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 GJD3Q8N144 294 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 CRIPAKQ8N1N5 446 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 FTHL17Q9BXU8 183 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 CLDND1Q9NY35 253 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
LTBR-205ENST00000535739 DHX15O43143 795 aaKnown RBP23.43■■□□□ 1.34
LTBR-205ENST00000535739 CSPG5O95196 566 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 SCG2P13521 617 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 KLRC1P26715 233 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 SLC26A2P50443 739 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 KRT76Q01546 638 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 PAK2Q13177 524 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 TMEM266Q2M3C6 531 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 PUS10Q3MIT2 529 aaKnown RBP23.43■■□□□ 1.34
LTBR-205ENST00000535739 TMEM31Q5JXX7 168 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 Q6ZUG5 572 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 CCDC60Q8IWA6 550 aaPredicted RBP23.43■■□□□ 1.34
LTBR-205ENST00000535739 NME8Q8N427 588 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 LMAN2LQ9H0V9 348 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 C11orf16Q9NQ32 467 aa23.43■■□□□ 1.34
LTBR-205ENST00000535739 MRPL42Q9Y6G3 142 aaKnown RBP23.43■■□□□ 1.34
LTBR-205ENST00000535739 KDM3AQ9Y4C1 1321 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 IGLV3-22A0A075B6J6 115 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 FAM86C2PA6NEL3 165 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 PI4K2BG5E9Z4 385 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 HBP1O60381 514 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 SSTR3P32745 418 aaPredicted RBP23.42■■□□□ 1.34
LTBR-205ENST00000535739 FAM160B1Q5W0V3 765 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 NPAS4Q8IUM7 802 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 ATP8B4Q8TF62 1192 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 CRYGNQ8WXF5 182 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 TMX1Q9H3N1 280 aa23.42■■□□□ 1.34
LTBR-205ENST00000535739 ALG13Q9NP73 1137 aaKnown RBP23.42■■□□□ 1.34
LTBR-205ENST00000535739 IPO5O00410 1097 aaKnown RBP23.41■■□□□ 1.34
LTBR-205ENST00000535739 CYP3A4P08684 503 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 LTBRP36941 435 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 PAN2Q504Q3 1202 aaKnown RBP23.41■■□□□ 1.34
LTBR-205ENST00000535739 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 PDXDC2PQ6P474 469 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 CMTR2Q8IYT2 770 aaKnown RBP23.41■■□□□ 1.34
LTBR-205ENST00000535739 KCNB2Q92953 911 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 BRF1Q92994 677 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 JAKMIP1Q96N16 626 aaKnown RBP23.41■■□□□ 1.34
LTBR-205ENST00000535739 ZMYND12Q9H0C1 365 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 CDHR5Q9HBB8 845 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 ZNF302Q9NR11 478 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 GINS2Q9Y248 185 aa23.41■■□□□ 1.34
LTBR-205ENST00000535739 CCDC196A0A1B0GTZ2 297 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 ATP4AP20648 1035 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 IBSPP21815 317 aaPredicted RBP23.4■■□□□ 1.34
LTBR-205ENST00000535739 GATMP50440 423 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 HYAL1Q12794 435 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 NFX1Q12986 1120 aaKnown RBP23.4■■□□□ 1.34
LTBR-205ENST00000535739 PKN1Q16512 942 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 MIS18BP1Q6P0N0 1132 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 KIAA0319LQ8IZA0 1049 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms