RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 ESYT1Q9BSJ8 1104 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 CDY2AQ9Y6F7 541 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 ESYT2A0FGR8 921 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 DHX15O43143 795 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 UPP2O95045 317 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 STAG3L1P0CL83 205 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 STAT5BP51692 787 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 ACTR2P61160 394 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 FAM189BP81408 668 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 SMAD4Q13485 552 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 PLCB4Q15147 1175 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 ABHD15Q6UXT9 468 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 EFHBQ8N7U6 833 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 SPPL3Q8TCT6 385 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 AZI2Q9H6S1 392 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 PADI3Q9ULW8 664 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 TRPV2Q9Y5S1 764 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
CLSTN3-206ENST00000535668 NID2Q14112 1375 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 WDFY4Q6ZS81 3184 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 H3BQ06 376 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 MBTPS2O43462 519 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 HBP1O60381 514 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 CTNNB1P35222 781 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 ITGB3BPQ13352 177 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 BTG3Q14201 252 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 BMP2KLQ5H9B9 411 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 TMEM184AQ6ZMB5 413 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 SMRP1Q8NCR6 262 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 CYP2W1Q8TAV3 490 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 ATP8B4Q8TF62 1192 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 KCNB2Q92953 911 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 PPP2R3CQ969Q6 453 aa12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 ELAC1Q9H777 363 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-206ENST00000535668 IGLV3-22A0A075B6J6 115 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 ITGB1P05556 798 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 CD52P31358 61 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 KCNC3Q14003 757 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 PKN1Q16512 942 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 ODR4Q5SWX8 454 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 PDE12Q6L8Q7 609 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 KIAA0319LQ8IZA0 1049 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 SDF4Q9BRK5 362 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 TMX1Q9H3N1 280 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 C1orf112Q9NSG2 853 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-206ENST00000535668 C9IYK1 514 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 M0QZ92 97 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 STXBP3O00186 592 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 TBX10O75333 385 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CCNE2O96020 404 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 ARP10275 920 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 SCG2P13521 617 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CIITAP33076 1130 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 IRS1P35568 1242 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 UBE2SQ16763 222 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 SLC24A5Q71RS6 500 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 AGXT2Q9BYV1 514 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 ZMYND12Q9H0C1 365 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 TBC1D22BQ9NU19 505 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CLDND1Q9NY35 253 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 CLEC1BQ9P126 229 aa12.79□□□□□ -0.36
CLSTN3-206ENST00000535668 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 ATF7P17544 494 aaPredicted RBP12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 DNAJB1P25685 340 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 MARK3P27448 753 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 EVCP57679 992 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 KRT76Q01546 638 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 SP4Q02446 784 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 PAK2Q13177 524 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 KRT32Q14532 448 aa12.78□□□□□ -0.36
CLSTN3-206ENST00000535668 ZNF746Q6NUN9 644 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms