RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 A0A0U1RQG5 324 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 ESYT3A0FGR9 886 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 HMGB1P1B2RPK0 211 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 E9PMD0 336 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 PIK3CDO00329 1044 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 ZBTB5O15062 677 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 FAM107AO95990 144 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 ACTN1P12814 892 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SLC9A1P19634 815 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 ACTN3Q08043 901 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 KCNH2Q12809 1159 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SPA17Q15506 151 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 UBE2SQ16763 222 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SLC4A8Q2Y0W8 1093 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 C1orf220Q5T0J3 134 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 DUPD1Q68J44 220 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 MMS22LQ6ZRQ5 1243 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SH3BP5LQ7L8J4 393 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 CLEC10AQ8IUN9 316 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 IFT20Q8IY31 132 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 TBC1D16Q8TBP0 767 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 ATXN2LQ8WWM7 1075 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 TBC1D5Q92609 795 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 CENPTQ96BT3 561 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 HINFPQ9BQA5 517 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 OSBPL7Q9BZF2 842 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 DHX36Q9H2U1 1008 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 VCPKMTQ9H867 229 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 DDX25Q9UHL0 483 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 PACSIN2Q9UNF0 486 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 COG5Q9UP83 839 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 FRMPD2Q68DX3 1309 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 GOLGB1Q14789 3259 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 BRCA1P38398 1863 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 FAM86B1E9PN63 330 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 PDXKO00764 312 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 MEFVO15553 781 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 OPA1O60313 960 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 MTA2O94776 668 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 GFPT2O94808 682 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 BAG3O95817 575 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 FTCDO95954 541 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 NUDT17P0C025 328 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 FAM86B2P0C5J1 330 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 PLA2G4BP0C869 781 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 VCAM1P19320 739 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 RPA1P27694 616 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 JAG1P78504 1218 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 PDCLQ13371 301 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 CUL1Q13616 776 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SHROOM1Q2M3G4 852 aaPredicted RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 SLC9C1Q4G0N8 1177 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 HSP90B2PQ58FF3 399 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 FAM26FQ5R3K3 315 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 AGBL2Q5U5Z8 902 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 APOBEC3HQ6NTF7 200 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 C8orf74Q6P047 294 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 BTNL9Q6UXG8 535 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 KCTD17Q8N5Z5 321 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 ANKRD13CQ8N6S4 541 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SNX29Q8TEQ0 813 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 CCDC43Q96MW1 224 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 ALS2CR12Q96Q35 445 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 SETDB2Q96T68 719 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 HSD17B14Q9BPX1 270 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
CTSC-208ENST00000533897 DEFB129Q9H1M3 183 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 EPB41L5Q9HCM4 733 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 GRHL1Q9NZI5 618 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 RPTORQ8N122 1335 aa4.85□□□□□ -1.63
CTSC-208ENST00000533897 KIAA1217Q5T5P2 1943 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 ZSWIM8A7E2V4 1837 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 POTEB3A0JP26 581 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 POTECB2RU33 542 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 NPM3O75607 178 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 FGFR1OPO95684 399 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 ITGA4P13612 1032 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 SREBF1P36956 1147 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 DRG2P55039 364 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 POLR2FP61218 127 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 GUCY1A3Q02108 690 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 CYP1B1Q16678 543 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 TTC31Q49AM3 519 aaPredicted RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 POTEBQ6S5H4 581 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 TPTE2Q6XPS3 522 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 SPATS2Q86XZ4 545 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 MAGEC3Q8TD91 643 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 PBKQ96KB5 322 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 TMEM109Q9BVC6 243 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 LRRC27Q9C0I9 530 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 PFASO15067 1338 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 USP17L10C9JJH3 530 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 F8VZ95 297 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 DNM1LO00429 736 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 TTLL1O95922 423 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 CTNNA2P26232 953 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 HDLBPQ00341 1268 aaKnown RBP4.84□□□□□ -1.63
CTSC-208ENST00000533897 PAK2Q13177 524 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 PLS1Q14651 629 aa4.84□□□□□ -1.63
CTSC-208ENST00000533897 KIF22Q14807 665 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms