RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MRPS9P82933 396 aaKnown RBP5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 SNX17Q15036 470 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 LLGL1Q15334 1064 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 GPR19Q15760 415 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 DPY19L1Q2PZI1 675 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 PGS1Q32NB8 556 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 TUBB8Q3ZCM7 444 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 PGBD2Q6P3X8 592 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 C1orf229Q6ZS94 237 aaPredicted RBP5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 NME9Q86XW9 330 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 SUGP1Q8IWZ8 645 aaKnown RBP5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 SMYD4Q8IYR2 804 aaPredicted RBP5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 NUDT8Q8WV74 236 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 PHKBQ93100 1093 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 RAX2Q96IS3 184 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 MAML3Q96JK9 1138 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 VPS11Q9H270 941 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 BHMT2Q9H2M3 363 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 SMOC1Q9H4F8 434 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 PCIF1Q9H4Z3 704 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 IPPKQ9H8X2 491 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 DMRT3Q9NQL9 472 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 CATSPERZQ9NTU4 200 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 ADGRE2Q9UHX3 823 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 TTLL3Q9Y4R7 772 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 PCDHA11Q9Y5I1 949 aa5.17□□□□□ -1.58
AC055878.1-201ENST00000531858 A0A087WV62 115 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 DYTNA2CJ06 578 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 H0Y8X5 98 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 M0R3H8 397 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ORC4O43929 436 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 SNX2O60749 519 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 RNGTTO60942 597 aaKnown RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ADAM11O75078 769 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 HIP1RO75146 1068 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 PLS3P13797 630 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ENDOUP21128 410 aaKnown RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 BMP8BP34820 402 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 IL6STP40189 918 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 CASP5P51878 434 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 IRF9Q00978 393 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 SOX4Q06945 474 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 PRKG2Q13237 762 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 PDCD1Q15116 288 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ANO4Q32M45 955 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 NUTM2GQ5VZR2 741 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 NPNTQ6UXI9 565 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 SLCO4C1Q6ZQN7 724 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 C1orf122Q6ZSJ8 110 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ILDR2Q71H61 639 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 CCDC103Q8IW40 242 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 THEMISQ8N1K5 641 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 DAGLBQ8NCG7 672 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 GALNT11Q8NCW6 608 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 CXorf38Q8TB03 319 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 XAGE3Q8WTP9 111 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 USP13Q92995 863 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 LTV1Q96GA3 475 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 TMEM41AQ96HV5 264 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 ELF4Q99607 663 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 PTPN18Q99952 460 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 COLEC11Q9BWP8 271 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 B3GNT5Q9BYG0 378 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 RNF208Q9H0X6 261 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 RSPH9Q9H1X1 276 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 DCP1AQ9NPI6 582 aaPredicted RBP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 TPCN1Q9ULQ1 816 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 CBLCQ9ULV8 474 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 AP4E1Q9UPM8 1137 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 PCDHGB6Q9Y5F9 930 aa5.16□□□□□ -1.58
AC055878.1-201ENST00000531858 LRRC10BA6NIK2 292 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 RHPN2P1A8MT19 583 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 STXBP3O00186 592 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 ARNTLO00327 626 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 DDX3XO00571 662 aaKnown RBP eCLIP5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 ADAMTS3O15072 1205 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 CD3EP07766 207 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 HOXB4P17483 251 aaPredicted RBP5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 PAMP19021 973 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 SLC9A1P19634 815 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 TNFSF4P23510 183 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 TECP42680 631 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 PRIM2P49643 509 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 KIF23Q02241 960 aaPredicted RBP5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 LSAMPQ13449 338 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 MOGSQ13724 837 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 EPHA7Q15375 998 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 CCDC38Q502W7 563 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 FAAH2Q6GMR7 532 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 RETSATQ6NUM9 610 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 CC2D1AQ6P1N0 951 aaPredicted RBP5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 RFX8Q6ZV50 586 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 PDZD4Q76G19 769 aaPredicted RBP5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 KCNK18Q7Z418 384 aa5.15□□□□□ -1.59
AC055878.1-201ENST00000531858 UBE3DQ7Z6J8 389 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms