RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 OSBPL1AQ9BXW6 950 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 SPC25Q9HBM1 224 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CASS4Q9NQ75 786 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 PPP1R1BQ9UD71 204 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBGCP4Q9UGJ1 667 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 PRELID1Q9Y255 219 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CORINQ9Y5Q5 1042 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 MRFAP1Q9Y605 127 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 FHOD1Q9Y613 1164 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 SLC12A7Q9Y666 1083 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC88BA6NC98 1476 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SOGA1O94964 1423 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ANKRD36BQ8N2N9 1353 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SLC22A31A6NKX4 558 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 A6NNZ2 444 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 H0YC42 278 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZEB2O60315 1214 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 RNF8O76064 485 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 FGFR1OPO95684 399 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 MBD3O95983 291 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 RPN1P04843 607 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SSBP05455 408 aaKnown RBP eCLIP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 PNMA6AP0CW24 399 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ETV3P41162 512 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 MAGEA10P43363 369 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 AMPHP49418 695 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TPD52P55327 224 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TBX4P57082 545 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 PPIDQ08752 370 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SNX1Q13596 522 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 BTG3Q14201 252 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TNIP1Q15025 636 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZSCAN23Q3MJ62 389 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TUBB8Q3ZCM7 444 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ADALQ6DHV7 355 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TLDC1Q6P9B6 456 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TMCO3Q6UWJ1 677 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 BEND5Q7L4P6 421 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 REXO1L1PQ8IX06 675 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SLC7A5P1Q8MH63 180 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 THEMISQ8N1K5 641 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CEP112Q8N8E3 955 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZBTB8BQ8NAP8 495 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TRIM58Q8NG06 486 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CYB5D2Q8WUJ1 264 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ANKRD49Q8WVL7 239 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZFPM2Q8WW38 1151 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZKSCAN4Q969J2 545 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SPDL1Q96EA4 605 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ZNF512BQ96KM6 892 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ANKRD27Q96NW4 1050 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CGREF1Q99674 301 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 DUSP23Q9BVJ7 150 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 EIF2AQ9BY44 585 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 UPF3BQ9BZI7 483 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TNMDQ9H2S6 317 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CNNM2Q9H8M5 875 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 FBRSQ9HAH7 460 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 MKNK2Q9HBH9 465 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CD248Q9HCU0 757 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CFDP1Q9UEE9 299 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SFMBT1Q9UHJ3 866 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 ASAP1Q9ULH1 1129 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 CORO1CQ9ULV4 474 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TMCO1Q9UM00 188 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 TRAF3IP3Q9Y228 551 aa5.33□□□□□ -1.56
ECHDC1-221ENST00000531582 SETD5Q9C0A6 1442 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 KIF21AQ7Z4S6 1674 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 GTPBP10A4D1E9 387 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 TTC34A8MYJ7 566 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 K7ELQ4 463 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 M0QX08 132 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 IGF2BP3O00425 579 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 LSM1O15116 133 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 WDR46O15213 610 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 BIRC5O15392 142 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 TMCC1O94876 653 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 SLU7O95391 586 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 FURINP09958 794 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 RAG1P15918 1043 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 GRIK1P39086 918 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 TSPAN7P41732 249 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 BASP1P80723 227 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 IFFO1Q0D2I5 559 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 STIM1Q13586 685 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 DHX8Q14562 1220 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 COG2Q14746 738 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 NKG7Q16617 165 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 CFAP58Q5T655 872 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 PRAMEF13Q5VWM6 474 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 CAPRIN2Q6IMN6 1127 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 LETMD1Q6P1Q0 360 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 INTS5Q6P9B9 1019 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 FBXO38Q6PIJ6 1188 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 TTLL7Q6ZT98 887 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms