RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PCDHA2Q9Y5H9 948 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 M0QZ92 97 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 STXBP3O00186 592 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 IBSPP21815 317 aaPredicted RBP21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 GATMP50440 423 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 STAT5BP51692 787 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 ADCY7P51828 1080 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 FUT2Q10981 343 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 CAMK1Q14012 370 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 RTN1Q16799 776 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 CTC1Q2NKJ3 1217 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 CEP55Q53EZ4 464 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 PLPPR4Q7Z2D5 763 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 CRIPAKQ8N1N5 446 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 NEK1Q96PY6 1258 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 RBM28Q9NW13 759 aaKnown RBP21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 ARIH1Q9Y4X5 557 aaPredicted RBP21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 V9GY48 417 aaPredicted RBP21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 IGSF9BQ9UPX0 1349 aa21.03■□□□□ 0.96
SSSCA1-206ENST00000531405 DDX39AO00148 427 aaKnown RBP21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 LINC01565O15544 149 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 ZBTB43O43298 467 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 TBX10O75333 385 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 MMP1P03956 469 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 RPLP2P05387 115 aaKnown RBP21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 DNAJB1P25685 340 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 PAK2Q13177 524 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 TMEM266Q2M3C6 531 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 PPP1R18Q6NYC8 613 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 UIMC1Q96RL1 719 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 FTHL17Q9BXU8 183 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 CELF4Q9BZC1 486 aaKnown RBP21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 PLAGL2Q9UPG8 496 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 FAM50BQ9Y247 325 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 SQORQ9Y6N5 450 aa21.02■□□□□ 0.96
SSSCA1-206ENST00000531405 SMCO2A6NFE2 343 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 PRR33A8MZF0 331 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 NCK2O43639 380 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 CCNE2O96020 404 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 FOSP01100 380 aaPredicted RBP21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 ALADP13716 330 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 HOXD11P31277 338 aaPredicted RBP21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 EXOSC10Q01780 885 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 MTHFD1LQ6UB35 978 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 NPAS4Q8IUM7 802 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 CMTR2Q8IYT2 770 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 PLVAPQ9BX97 442 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 TMX1Q9H3N1 280 aa21.01■□□□□ 0.95
SSSCA1-206ENST00000531405 SMIM35A0A1B0GVV1 85 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 C19orf67A6NJJ6 358 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 GOLGA8AA7E2F4 631 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 GOLGA8BA8MQT2 603 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 MEIS1O00470 390 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 DCXO43602 365 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 ATG7O95352 703 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 ITGB1P05556 798 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 SCG2P13521 617 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 SREBF1P36956 1147 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 KRT76Q01546 638 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 RNF20Q5VTR2 975 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 ADHFE1Q8IWW8 467 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 RASEFQ8IZ41 740 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 TNPO1Q92973 898 aaKnown RBP21■□□□□ 0.95
SSSCA1-206ENST00000531405 BARHL2Q9NY43 387 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 PRKAG3Q9UGI9 489 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 GINS2Q9Y248 185 aa21■□□□□ 0.95
SSSCA1-206ENST00000531405 ZNF318Q5VUA4 2279 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 KLF18A0A0U1RQI7 1052 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 BACH1O14867 736 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 MBTPS2O43462 519 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 KLRC1P26715 233 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 CDC27P30260 824 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 ZNF76P36508 570 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 CLK2P49760 499 aaKnown RBP20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 ADGRD2Q7Z7M1 963 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 CCDC60Q8IWA6 550 aaPredicted RBP20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 KLHL23Q8NBE8 558 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 SPPL3Q8TCT6 385 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 P2RX5Q93086 422 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 CDHR5Q9HBB8 845 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 KDM3AQ9Y4C1 1321 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 PIEZO1Q92508 2521 aa20.99■□□□□ 0.95
SSSCA1-206ENST00000531405 IGKV6D-21A0A0A0MT36 114 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 ADAMTS3O15072 1205 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 MGEA5O60502 916 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 STAG3L1P0CL83 205 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 IRS1P35568 1242 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 NFX1Q12986 1120 aaKnown RBP20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 AP3B2Q13367 1082 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 SMAD2Q15796 467 aaKnown RBP20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 JAKMIP3Q5VZ66 844 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 ABHD15Q6UXT9 468 aa20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 NAP1L2Q9ULW6 460 aaPredicted RBP20.98■□□□□ 0.95
SSSCA1-206ENST00000531405 hCG_1984214I3L0E3 225 aa20.97■□□□□ 0.95
SSSCA1-206ENST00000531405 SLC26A2P50443 739 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms