RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
CTSB-215ENST00000528965 BACH1O14867 736 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 PLA2G5P39877 138 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 FUT2Q10981 343 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 TYW1BQ6NUM6 668 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 POTEBQ6S5H4 581 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 PPP2R3CQ969Q6 453 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 TCEANC2Q96MN5 208 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 LRFN3Q9BTN0 628 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
CTSB-215ENST00000528965 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 RAPGEFL1Q9UHV5 662 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 GRXCR2A6NFK2 248 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 MEIS1O00470 390 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 GPR37L1O60883 481 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 DGKIO75912 1065 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 ARP10275 920 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 IL9P15248 144 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 SETQ01105 290 aaPredicted RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 KRT76Q01546 638 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 COL19A1Q14993 1142 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 ODR4Q5SWX8 454 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 CMTR2Q8IYT2 770 aaKnown RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 CYP2W1Q8TAV3 490 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 ZNF689Q96CS4 500 aaPredicted RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 CELF4Q9BZC1 486 aaKnown RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 AGO3Q9H9G7 860 aaKnown RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 ARIH1Q9Y4X5 557 aaPredicted RBP17.79■□□□□ 0.44
CTSB-215ENST00000528965 COL1A2P08123 1366 aa17.79■□□□□ 0.44
CTSB-215ENST00000528965 PI4K2BG5E9Z4 385 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 HBP1O60381 514 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 ATG7O95352 703 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 MMP1P03956 469 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 SCG2P13521 617 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
CTSB-215ENST00000528965 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.441e-8■■■■■ 33.2
CTSB-215ENST00000528965 TMEM62Q0P6H9 643 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 NAALADL2Q58DX5 795 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 MTHFD1LQ6UB35 978 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 PLA2G4DQ86XP0 818 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 ATP8B4Q8TF62 1192 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 TRAPPC12Q8WVT3 735 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 LRFN2Q9ULH4 789 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 PADI3Q9ULW8 664 aa17.78■□□□□ 0.44
CTSB-215ENST00000528965 TTC3P53804 2025 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 ESYT2A0FGR8 921 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
CTSB-215ENST00000528965 NEFLP07196 543 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 LINC00271P0C7V0 271 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 ALADP13716 330 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 PFKFB3Q16875 520 aaPredicted RBP17.77■□□□□ 0.44
CTSB-215ENST00000528965 ADCK5Q3MIX3 580 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 RASEFQ8IZ41 740 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 LINC01599Q8WXQ3 324 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 P2RX5Q93086 422 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 ZBTB10Q96DT7 871 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 C6orf50Q9HD87 102 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 ZNF302Q9NR11 478 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
CTSB-215ENST00000528965 IGKV6D-21A0A0A0MT36 114 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 GRM6O15303 877 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 ZNF484Q5JVG2 852 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 REXO1Q8N1G1 1221 aaKnown RBP17.76■□□□□ 0.43
CTSB-215ENST00000528965 POP1Q99575 1024 aaKnown RBP17.76■□□□□ 0.43
CTSB-215ENST00000528965 CD320Q9NPF0 282 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 TBC1D22BQ9NU19 505 aa17.76■□□□□ 0.43
CTSB-215ENST00000528965 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
CTSB-215ENST00000528965 IPO5O00410 1097 aaKnown RBP17.75■□□□□ 0.43
CTSB-215ENST00000528965 CCNE2O96020 404 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 CYP3A4P08684 503 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 GNA11P29992 359 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 CDC27P30260 824 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
CTSB-215ENST00000528965 ABHD15Q6UXT9 468 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 CCDC60Q8IWA6 550 aaPredicted RBP17.75■□□□□ 0.43
CTSB-215ENST00000528965 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 SMAP1Q8IYB5 467 aaPredicted RBP17.75■□□□□ 0.43
CTSB-215ENST00000528965 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 KHSRPQ92945 711 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTSB-215ENST00000528965 ZNF577Q9BSK1 485 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 ZMYND12Q9H0C1 365 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 C1orf112Q9NSG2 853 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 GINS2Q9Y248 185 aa17.75■□□□□ 0.43
CTSB-215ENST00000528965 DENND3A2RUS2 1198 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 RPS6KA5O75582 802 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 KLRC1P26715 233 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 SARSP49591 514 aaKnown RBP17.74■□□□□ 0.43
CTSB-215ENST00000528965 HYAL1Q12794 435 aa17.74■□□□□ 0.43
CTSB-215ENST00000528965 NFX1Q12986 1120 aaKnown RBP17.74■□□□□ 0.43
CTSB-215ENST00000528965 PAN2Q504Q3 1202 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms