RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 DDX39AO00148 427 aaKnown RBP29.44■■■□□ 2.3
TRIM3-206ENST00000528227 CTNNB1P35222 781 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 TMEM62Q0P6H9 643 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 ABHD15Q6UXT9 468 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 PLA2G4DQ86XP0 818 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.44■■■□□ 2.3
TRIM3-206ENST00000528227 JAKMIP1Q96N16 626 aaKnown RBP29.44■■■□□ 2.3
TRIM3-206ENST00000528227 C1QTNF1Q9BXJ1 281 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 RWDD3Q9Y3V2 267 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 IGLV3-22A0A075B6J6 115 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 SMIM35A0A1B0GVV1 85 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 ESYT2A0FGR8 921 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 RB1P06400 928 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 CYP3A4P08684 503 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 HSPA4P34932 840 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 BMPR1AP36894 532 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 MTHFD1LQ6UB35 978 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 BRF1Q92994 677 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 ZMYND12Q9H0C1 365 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 SNX14Q9Y5W7 946 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 IGSF9BQ9UPX0 1349 aa29.43■■■□□ 2.3
TRIM3-206ENST00000528227 LOXHD1Q8IVV2 1947 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 ADAMTS3O15072 1205 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 DHX15O43143 795 aaKnown RBP29.42■■■□□ 2.3
TRIM3-206ENST00000528227 DGKIO75912 1065 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 TCEAL5Q5H9L2 206 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 RTN4RL1Q86UN2 441 aaPredicted RBP29.42■■■□□ 2.3
TRIM3-206ENST00000528227 CLP1Q92989 425 aaKnown RBP29.42■■■□□ 2.3
TRIM3-206ENST00000528227 FTHL17Q9BXU8 183 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 CELF4Q9BZC1 486 aaKnown RBP29.42■■■□□ 2.3
TRIM3-206ENST00000528227 NSUN3Q9H649 340 aaKnown RBP29.42■■■□□ 2.3
TRIM3-206ENST00000528227 PADI3Q9ULW8 664 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 KDM3AQ9Y4C1 1321 aa29.42■■■□□ 2.3
TRIM3-206ENST00000528227 ATG2AQ2TAZ0 1938 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 BTG3Q14201 252 aaPredicted RBP29.41■■■□□ 2.3
TRIM3-206ENST00000528227 PKN1Q16512 942 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 FAM160B1Q5W0V3 765 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 BLOC1S2Q6QNY1 142 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 CCDC60Q8IWA6 550 aaPredicted RBP29.41■■■□□ 2.3
TRIM3-206ENST00000528227 CRIPAKQ8N1N5 446 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 NME8Q8N427 588 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 FBXL16Q8N461 479 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 NEK9Q8TD19 979 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 ATP8B4Q8TF62 1192 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 C11orf84Q9BUA3 381 aaPredicted RBP29.41■■■□□ 2.3
TRIM3-206ENST00000528227 EPHX3Q9H6B9 360 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 RAPGEFL1Q9UHV5 662 aa29.41■■■□□ 2.3
TRIM3-206ENST00000528227 BACH1O14867 736 aa29.4■■■□□ 2.3
TRIM3-206ENST00000528227 PRPF3O43395 683 aaKnown RBP29.4■■■□□ 2.3
TRIM3-206ENST00000528227 HBP1O60381 514 aa29.4■■■□□ 2.3
TRIM3-206ENST00000528227 COL19A1Q14993 1142 aa29.4■■■□□ 2.3
TRIM3-206ENST00000528227 MCTP2Q6DN12 878 aa29.4■■■□□ 2.3
TRIM3-206ENST00000528227 CCDC12Q8WUD4 166 aaPredicted RBP29.4■■■□□ 2.3
TRIM3-206ENST00000528227 C6orf50Q9HD87 102 aa29.4■■■□□ 2.3
TRIM3-206ENST00000528227 IPO5O00410 1097 aaKnown RBP29.39■■■□□ 2.3
TRIM3-206ENST00000528227 KLRC1P26715 233 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 KRT76Q01546 638 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 PAK2Q13177 524 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 MIS18BP1Q6P0N0 1132 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 REXO1Q8N1G1 1221 aaKnown RBP29.39■■■□□ 2.3
TRIM3-206ENST00000528227 PABPC5Q96DU9 382 aaKnown RBP29.39■■■□□ 2.3
TRIM3-206ENST00000528227 AGXT2Q9BYV1 514 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 LMAN2LQ9H0V9 348 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 CD320Q9NPF0 282 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 ZNF302Q9NR11 478 aa29.39■■■□□ 2.3
TRIM3-206ENST00000528227 COL1A2P08123 1366 aa29.39■■■□□ 2.29
TRIM3-206ENST00000528227 GRM6O15303 877 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 RPS6KB1P23443 525 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 PTCRAQ6ISU1 281 aaPredicted RBP29.38■■■□□ 2.29
TRIM3-206ENST00000528227 PDXDC2PQ6P474 469 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 NPAS4Q8IUM7 802 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 KHSRPQ92945 711 aaKnown RBP eCLIP29.38■■■□□ 2.29
TRIM3-206ENST00000528227 UIMC1Q96RL1 719 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 ZNF577Q9BSK1 485 aa29.38■■■□□ 2.29
TRIM3-206ENST00000528227 IL9P15248 144 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 SETQ01105 290 aaPredicted RBP29.37■■■□□ 2.29
TRIM3-206ENST00000528227 SWSAP1Q6NVH7 229 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 FAM178BQ8IXR5 827 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 CMTR2Q8IYT2 770 aaKnown RBP29.37■■■□□ 2.29
TRIM3-206ENST00000528227 PHKBQ93100 1093 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 TMX1Q9H3N1 280 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 TBC1D22BQ9NU19 505 aa29.37■■■□□ 2.29
TRIM3-206ENST00000528227 GRXCR2A6NFK2 248 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 ZBTB42B2RXF5 422 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 H3BQ06 376 aaPredicted RBP29.36■■■□□ 2.29
TRIM3-206ENST00000528227 ATP4AP20648 1035 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 GNA11P29992 359 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 NTRK3Q16288 839 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 PUS10Q3MIT2 529 aaKnown RBP29.36■■■□□ 2.29
TRIM3-206ENST00000528227 ZNF484Q5JVG2 852 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 KIAA0319LQ8IZA0 1049 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 PLVAPQ9BX97 442 aa29.36■■■□□ 2.29
TRIM3-206ENST00000528227 MRPL42Q9Y6G3 142 aaKnown RBP29.36■■■□□ 2.29
TRIM3-206ENST00000528227 TMEM266Q2M3C6 531 aa29.35■■■□□ 2.29
TRIM3-206ENST00000528227 ZNF746Q6NUN9 644 aaPredicted RBP29.35■■■□□ 2.29
TRIM3-206ENST00000528227 KIAA1671Q9BY89 1806 aa29.35■■■□□ 2.29
TRIM3-206ENST00000528227 STAG3L1P0CL83 205 aa29.34■■■□□ 2.29
TRIM3-206ENST00000528227 AKAP17AQ02040 695 aaKnown RBP29.34■■■□□ 2.29
TRIM3-206ENST00000528227 RNF26Q9BY78 433 aaPredicted RBP29.34■■■□□ 2.29
TRIM3-206ENST00000528227 CDHR5Q9HBB8 845 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms