RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FAM133BQ5BKY9 247 aaKnown RBP15.97■□□□□ 0.15
CAPN1-214ENST00000528165 PIGWQ7Z7B1 504 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 DNAAF5Q86Y56 855 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 NELFCDQ8IXH7 590 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 SYCE1Q8N0S2 351 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 PANK4Q9NVE7 773 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 SUCLA2Q9P2R7 463 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-214ENST00000528165 C15orf41Q9Y2V0 281 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 FLOT1O75955 427 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 ANP32DO95626 131 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 ZBTB48P10074 688 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-214ENST00000528165 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 TRPM8Q7Z2W7 1104 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 KCNK18Q7Z418 384 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 DAAM2Q86T65 1068 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 DYNLL2Q96FJ2 89 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 ELAC2Q9BQ52 826 aaKnown RBP15.97■□□□□ 0.15
CAPN1-214ENST00000528165 TRIM51Q9BSJ1 452 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 TBC1D7Q9P0N9 293 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 SEC63Q9UGP8 760 aaKnown RBP15.97■□□□□ 0.15
CAPN1-214ENST00000528165 TLDC2A0PJX2 215 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 MARSP56192 900 aaKnown RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 ZKSCAN8Q15776 578 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 LRRC34Q8IZ02 419 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 ATXN2LQ8WWM7 1075 aaKnown RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 BMP2KQ9NSY1 1161 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 CCDC169A6NNP5 214 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 VIMP08670 466 aaKnown RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 MMP13P45452 471 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 IRX1P78414 480 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 KCNH2Q12809 1159 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 NUDT12Q9BQG2 462 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 NSRP1Q9H0G5 558 aaKnown RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 INTS9Q9NV88 658 aaKnown RBP15.96■□□□□ 0.15
CAPN1-214ENST00000528165 L3MBTL1Q9Y468 752 aa15.96■□□□□ 0.15
CAPN1-214ENST00000528165 SHBGP04278 402 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 ACTN1P12814 892 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 NT5C2P49902 561 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PDIA5Q14554 519 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SEPT2Q15019 361 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 DENND2CQ68D51 928 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 NEK9Q8TD19 979 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 DNAJC19Q96DA6 116 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PGM2Q96G03 612 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 TXLNGYQ9BZA5 131 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SKAP2O75563 359 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 FGGP02679 453 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 NUDT17P0C025 328 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 H2AFZP0C0S5 128 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 ADAM9Q13443 819 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SLMAPQ14BN4 828 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 H2AFVQ71UI9 128 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 VPS36Q86VN1 386 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 TMEM260Q9NX78 707 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 NOP53Q9NZM5 478 aaKnown RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SMIM23A6NLE4 172 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 KIF3CO14782 793 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 RGS16O15492 202 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SLC37A4O43826 429 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PRDX5P30044 214 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PMS2P54278 862 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 TMEM119Q4V9L6 283 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 SLFN11Q7Z7L1 901 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 ATP8B4Q8TF62 1192 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 PABPC3Q9H361 631 aaKnown RBP15.95■□□□□ 0.14
CAPN1-214ENST00000528165 VAT1LQ9HCJ6 419 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 STXBP5LQ9Y2K9 1186 aa15.95■□□□□ 0.14
CAPN1-214ENST00000528165 AFF2P51816 1311 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 UCHL3P15374 230 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 GCKP35557 465 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 NT5DC3Q86UY8 548 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
CAPN1-214ENST00000528165 SPDYE3A6NKU9 549 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 TDP2O95551 362 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 NTSR2O95665 410 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 SLC9A1P19634 815 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 DR1Q01658 176 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 POU5F1Q01860 360 aaKnown RBP15.94■□□□□ 0.14
CAPN1-214ENST00000528165 ZNF268Q14587 947 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-214ENST00000528165 AGAP11Q8TF27 550 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 SPDL1Q96EA4 605 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 HES6Q96HZ4 224 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 FGFBP2Q9BYJ0 223 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 AZI2Q9H6S1 392 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 AMFRQ9UKV5 643 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
CAPN1-214ENST00000528165 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
CAPN1-214ENST00000528165 A0A0A6YYK5 440 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-214ENST00000528165 CETN3O15182 167 aa15.93■□□□□ 0.14
CAPN1-214ENST00000528165 PRPF4BQ13523 1007 aaKnown RBP15.93■□□□□ 0.14
CAPN1-214ENST00000528165 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
CAPN1-214ENST00000528165 DHX37Q8IY37 1157 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms