RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ABHD15Q6UXT9 468 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 TEX2Q8IWB9 1127 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 GJD3Q8N144 294 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 CRYGNQ8WXF5 182 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 PADI3Q9ULW8 664 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 TRPV2Q9Y5S1 764 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 SQORQ9Y6N5 450 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 POTEB3A0JP26 581 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 DDX39AO00148 427 aaKnown RBP23.12■■□□□ 1.29
PABPC1-217ENST00000521067 CAMK1Q14012 370 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 BTG3Q14201 252 aaPredicted RBP23.12■■□□□ 1.29
PABPC1-217ENST00000521067 JAKMIP3Q5VZ66 844 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 POTEBQ6S5H4 581 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 MTHFD1LQ6UB35 978 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 CENPQQ7L2Z9 268 aaPredicted RBP23.12■■□□□ 1.29
PABPC1-217ENST00000521067 CELF4Q9BZC1 486 aaKnown RBP23.12■■□□□ 1.29
PABPC1-217ENST00000521067 TMX1Q9H3N1 280 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 CDHR5Q9HBB8 845 aa23.12■■□□□ 1.29
PABPC1-217ENST00000521067 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 IGLV3-22A0A075B6J6 115 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 SMIM35A0A1B0GVV1 85 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 FAM86C2PA6NEL3 165 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 hCG_1984214I3L0E3 225 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 ATP4AP20648 1035 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 KLRC1P26715 233 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 AP3B2Q13367 1082 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 CCDC60Q8IWA6 550 aaPredicted RBP23.11■■□□□ 1.29
PABPC1-217ENST00000521067 ZNF713Q8N859 430 aaPredicted RBP23.11■■□□□ 1.29
PABPC1-217ENST00000521067 KCNB2Q92953 911 aa23.11■■□□□ 1.29
PABPC1-217ENST00000521067 MRPL42Q9Y6G3 142 aaKnown RBP23.11■■□□□ 1.29
PABPC1-217ENST00000521067 CDC45O75419 566 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 RPLP2P05387 115 aaKnown RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 ZNF76P36508 570 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 DLX2Q07687 328 aaPredicted RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 APOBRQ0VD83 1088 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 HYAL1Q12794 435 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 KRT32Q14532 448 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 PKN1Q16512 942 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 PFKFB3Q16875 520 aaPredicted RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 TMEM266Q2M3C6 531 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 CTC1Q2NKJ3 1217 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 TMEM31Q5JXX7 168 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 EP400NLQ6ZTU2 488 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 NIPA1Q7RTP0 329 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 PLA2G4DQ86XP0 818 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 C11orf84Q9BUA3 381 aaPredicted RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 ALG13Q9NP73 1137 aaKnown RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 CLDND1Q9NY35 253 aa23.1■■□□□ 1.29
PABPC1-217ENST00000521067 NAP1L2Q9ULW6 460 aaPredicted RBP23.1■■□□□ 1.29
PABPC1-217ENST00000521067 KDM3AQ9Y4C1 1321 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 ZBTB42B2RXF5 422 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 GPR37L1O60883 481 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 CYP3A4P08684 503 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 GTF2F1P35269 517 aaKnown RBP eCLIP23.09■■□□□ 1.29
PABPC1-217ENST00000521067 GATMP50440 423 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 RCAN1P53805 252 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 KRT76Q01546 638 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 KIAA0319LQ8IZA0 1049 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 NME8Q8N427 588 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
PABPC1-217ENST00000521067 FTHL17Q9BXU8 183 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 PLAGL2Q9UPG8 496 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 RWDD3Q9Y3V2 267 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
PABPC1-217ENST00000521067 TRIOO75962 3097 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 BACH1O14867 736 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 HBP1O60381 514 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 CSPG5O95196 566 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 SCG2P13521 617 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 DNAJB1P25685 340 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 SLC26A2P50443 739 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 PUS10Q3MIT2 529 aaKnown RBP23.08■■□□□ 1.29
PABPC1-217ENST00000521067 SWSAP1Q6NVH7 229 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 Q6ZUG5 572 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 NPAS4Q8IUM7 802 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 ATP8B4Q8TF62 1192 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 TMEM40Q8WWA1 233 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 ZMYND12Q9H0C1 365 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 LMAN2LQ9H0V9 348 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 GLT8D2Q9H1C3 349 aa23.08■■□□□ 1.29
PABPC1-217ENST00000521067 M0QZ92 97 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 MGEA5O60502 916 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 HMGB1P09429 215 aaKnown RBP23.07■■□□□ 1.28
PABPC1-217ENST00000521067 METAP2P50579 478 aaKnown RBP eCLIP23.07■■□□□ 1.281e-36■■■□□ 16
PABPC1-217ENST00000521067 PAK2Q13177 524 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 PAN2Q504Q3 1202 aaKnown RBP23.07■■□□□ 1.28
PABPC1-217ENST00000521067 CMTR2Q8IYT2 770 aaKnown RBP23.07■■□□□ 1.28
PABPC1-217ENST00000521067 BRF1Q92994 677 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 PLVAPQ9BX97 442 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 ERVK-5Q9HDB9 667 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 ZNF302Q9NR11 478 aa23.07■■□□□ 1.28
PABPC1-217ENST00000521067 NOC2LQ9Y3T9 749 aaKnown RBP23.07■■□□□ 1.28
PABPC1-217ENST00000521067 IPO5O00410 1097 aaKnown RBP23.06■■□□□ 1.28
PABPC1-217ENST00000521067 EDIL3O43854 480 aa23.06■■□□□ 1.28
PABPC1-217ENST00000521067 PPFIA3O75145 1194 aa23.06■■□□□ 1.28
PABPC1-217ENST00000521067 MMP1P03956 469 aa23.06■■□□□ 1.28
PABPC1-217ENST00000521067 ITGB1P05556 798 aa23.06■■□□□ 1.28
PABPC1-217ENST00000521067 SSTR3P32745 418 aaPredicted RBP23.06■■□□□ 1.28
PABPC1-217ENST00000521067 PLA2G5P39877 138 aa23.06■■□□□ 1.28
PABPC1-217ENST00000521067 PDXDC2PQ6P474 469 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms