RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 C12orf42Q96LP6 360 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 LSG1Q9H089 658 aaKnown RBP6.9□□□□□ -1.3
FAM49B-218ENST00000520887 RPAP3Q9H6T3 665 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-218ENST00000520887 MTMR4Q9NYA4 1195 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 TNKSO95271 1327 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 NEDD4P46934 1319 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 MYPNQ86TC9 1320 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 LOC285556D6RIA3 1793 aa6.9□□□□□ -1.31
FAM49B-218ENST00000520887 CCDC196A0A1B0GTZ2 297 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 BTBD19C9JJ37 291 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PRC1O43663 620 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 FZD6O60353 706 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 FKTNO75072 461 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 ZBED4O75132 1171 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PARP1P09874 1014 aaKnown RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 BMP3P12645 472 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 GNAQP50148 359 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 FCGRTP55899 365 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 NLRP12P59046 1061 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 ANAPC15P60006 121 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PLS1Q14651 629 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 ANKRD1Q15327 319 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 ASPRV1Q53RT3 343 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 SLFN13Q68D06 897 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 CCDC84Q86UT8 332 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 GMCL1P1Q8NEA9 526 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 BRI3BPQ8WY22 251 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 BSNDQ8WZ55 320 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 COA7Q96BR5 231 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PAGR1Q9BTK6 254 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PCMTD2Q9NV79 361 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 RNF186Q9NXI6 227 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 SLC5A4Q9NY91 659 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 SEC63Q9UGP8 760 aaKnown RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-218ENST00000520887 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 CYP46A1Q9Y6A2 500 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 WDR19Q8NEZ3 1342 aa6.89□□□□□ -1.31
FAM49B-218ENST00000520887 PTPRFP10586 1907 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 F5H6K3 240 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 TLR2O60603 784 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 DDAH1O94760 285 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 FGRP09769 529 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 CASTP20810 708 aaKnown RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 HOXA7P31268 230 aaPredicted RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 SSTR4P31391 388 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 HSPA4P34932 840 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 PRMT2P55345 433 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 AKAP17AQ02040 695 aaKnown RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 SP3Q02447 781 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 KLRC3Q07444 240 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 COG2Q14746 738 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 FAM110CQ1W6H9 321 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 FAM83BQ5T0W9 1011 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 ANKRD34AQ69YU3 496 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 SPICE1Q8N0Z3 855 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 SLF1Q9BQI6 1058 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 RUSC1Q9BVN2 902 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 RBM28Q9NW13 759 aaKnown RBP6.88□□□□□ -1.31
FAM49B-218ENST00000520887 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
FAM49B-218ENST00000520887 PHIPQ8WWQ0 1821 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 TMEM232C9JQI7 657 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 IGF2BP3O00425 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
FAM49B-218ENST00000520887 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
FAM49B-218ENST00000520887 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
FAM49B-218ENST00000520887 CPLX1O14810 134 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 FOXP2O15409 715 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 TBC1D8O95759 1140 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 SLC25A27O95847 323 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 NDUFB10O96000 172 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 MAPK4P31152 587 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 HERVK_113P62684 666 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 CRHR2Q13324 411 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 IKBKEQ14164 716 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 NECTIN1Q15223 517 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 PKN2Q16513 984 aaKnown RBP6.87□□□□□ -1.31
FAM49B-218ENST00000520887 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 FAM43AQ8N2R8 423 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 DNAJC5GQ8N7S2 189 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 GPRC5AQ8NFJ5 357 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 ACER1Q8TDN7 264 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 MKL1Q969V6 931 aa6.87□□□□□ -1.31
FAM49B-218ENST00000520887 LZTS2Q9BRK4 669 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms