RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PAK2Q13177 524 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 BTG3Q14201 252 aaPredicted RBP17.26■□□□□ 0.35
CSMD1-207ENST00000520451 FAM160B1Q5W0V3 765 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 MTHFD1LQ6UB35 978 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 ABHD15Q6UXT9 468 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 KCNB2Q92953 911 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 C11orf84Q9BUA3 381 aaPredicted RBP17.26■□□□□ 0.35
CSMD1-207ENST00000520451 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 NSUN3Q9H649 340 aaKnown RBP17.26■□□□□ 0.35
CSMD1-207ENST00000520451 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 SNX14Q9Y5W7 946 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 NLRC5Q86WI3 1866 aa17.26■□□□□ 0.35
CSMD1-207ENST00000520451 IGSF9BQ9UPX0 1349 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 SMIM35A0A1B0GVV1 85 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 RB1P06400 928 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 CCDC60Q8IWA6 550 aaPredicted RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 REXO1Q8N1G1 1221 aaKnown RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 ATP8B4Q8TF62 1192 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 ZNF689Q96CS4 500 aaPredicted RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
CSMD1-207ENST00000520451 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 EPHX3Q9H6B9 360 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
CSMD1-207ENST00000520451 IGLV3-22A0A075B6J6 115 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 H3BQ06 376 aaPredicted RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 IPO5O00410 1097 aaKnown RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 DHX15O43143 795 aaKnown RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 HBP1O60381 514 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 DGKIO75912 1065 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 CYP3A4P08684 503 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 KLRC1P26715 233 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 HSPA4P34932 840 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 KRT76Q01546 638 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 PDXDC2PQ6P474 469 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 RTN4RL1Q86UN2 441 aaPredicted RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 NME8Q8N427 588 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 CLP1Q92989 425 aaKnown RBP17.24■□□□□ 0.35
CSMD1-207ENST00000520451 PHKBQ93100 1093 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 ZNF302Q9NR11 478 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 TTC3P53804 2025 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 NID2Q14112 1375 aa17.24■□□□□ 0.35
CSMD1-207ENST00000520451 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 GRM6O15303 877 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
CSMD1-207ENST00000520451 CSPG5O95196 566 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 IL9P15248 144 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 RPS6KB1P23443 525 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
CSMD1-207ENST00000520451 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
CSMD1-207ENST00000520451 PKN1Q16512 942 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
CSMD1-207ENST00000520451 LMAN2LQ9H0V9 348 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
CSMD1-207ENST00000520451 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
CSMD1-207ENST00000520451 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 STAG3L1P0CL83 205 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 IBSPP21815 317 aaPredicted RBP17.22■□□□□ 0.35
CSMD1-207ENST00000520451 GNA11P29992 359 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 PUS10Q3MIT2 529 aaKnown RBP17.22■□□□□ 0.35
CSMD1-207ENST00000520451 ZNF484Q5JVG2 852 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 FAM178BQ8IXR5 827 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 CKAP2LQ8IYA6 745 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 CMTR2Q8IYT2 770 aaKnown RBP17.22■□□□□ 0.35
CSMD1-207ENST00000520451 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 KHSRPQ92945 711 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSMD1-207ENST00000520451 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 CLDND1Q9NY35 253 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 COL1A2P08123 1366 aa17.22■□□□□ 0.35
CSMD1-207ENST00000520451 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
CSMD1-207ENST00000520451 REC8O95072 547 aa17.21■□□□□ 0.35
CSMD1-207ENST00000520451 PSMA5P28066 241 aa17.21■□□□□ 0.35
CSMD1-207ENST00000520451 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
CSMD1-207ENST00000520451 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
CSMD1-207ENST00000520451 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
CSMD1-207ENST00000520451 PRR16Q569H4 304 aa17.21■□□□□ 0.35
CSMD1-207ENST00000520451 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms