RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 NIPA1Q7RTP0 329 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 RTN4RL1Q86UN2 441 aaPredicted RBP13.43□□□□□ -0.26
MCM4-208ENST00000519470 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 CMTR2Q8IYT2 770 aaKnown RBP13.43□□□□□ -0.26
MCM4-208ENST00000519470 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 AGO4Q9HCK5 861 aaKnown RBP13.43□□□□□ -0.26
MCM4-208ENST00000519470 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
MCM4-208ENST00000519470 FAM86C2PA6NEL3 165 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 PRR33A8MZF0 331 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 M0QZ92 97 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 STXBP3O00186 592 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 MEIS1O00470 390 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 ARP10275 920 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 ALADP13716 330 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 STAT5BP51692 787 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 ZP2Q05996 745 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 HYAL1Q12794 435 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 CAMK1Q14012 370 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 RTN1Q16799 776 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 NME8Q8N427 588 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 CELF4Q9BZC1 486 aaKnown RBP13.42□□□□□ -0.26
MCM4-208ENST00000519470 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
MCM4-208ENST00000519470 CLDND1Q9NY35 253 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
MCM4-208ENST00000519470 ZBTB43O43298 467 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
MCM4-208ENST00000519470 ADCY7P51828 1080 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 PAK2Q13177 524 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 SMAD2Q15796 467 aaKnown RBP13.41□□□□□ -0.26
MCM4-208ENST00000519470 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 ABHD15Q6UXT9 468 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
MCM4-208ENST00000519470 ADHFE1Q8IWW8 467 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 CRYGNQ8WXF5 182 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 FAM217BQ9NTX9 383 aaPredicted RBP13.41□□□□□ -0.26
MCM4-208ENST00000519470 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
MCM4-208ENST00000519470 COL1A2P08123 1366 aa13.41□□□□□ -0.26
MCM4-208ENST00000519470 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
MCM4-208ENST00000519470 HBP1O60381 514 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 TBX10O75333 385 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 CCNE2O96020 404 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 CYP3A4P08684 503 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 STAG3L1P0CL83 205 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 SCG2P13521 617 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 DLX2Q07687 328 aaPredicted RBP13.4□□□□□ -0.26
MCM4-208ENST00000519470 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 TMX1Q9H3N1 280 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
MCM4-208ENST00000519470 EVPLQ92817 2033 aa13.4□□□□□ -0.26
MCM4-208ENST00000519470 FNDC1Q4ZHG4 1894 aaPredicted RBP13.4□□□□□ -0.26
MCM4-208ENST00000519470 IGLV3-22A0A075B6J6 115 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 MBTPS2O43462 519 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 DCXO43602 365 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ITGB1P05556 798 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 CDC27P30260 824 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
MCM4-208ENST00000519470 KRT76Q01546 638 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ADAM15Q13444 863 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
MCM4-208ENST00000519470 KRT32Q14532 448 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 FAM160B1Q5W0V3 765 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
MCM4-208ENST00000519470 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 SPPL3Q8TCT6 385 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
MCM4-208ENST00000519470 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 NID2Q14112 1375 aa13.39□□□□□ -0.27
MCM4-208ENST00000519470 MYH9P35579 1960 aaKnown RBP13.39□□□□□ -0.27
MCM4-208ENST00000519470 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 KLF18A0A0U1RQI7 1052 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 EYA4O95677 639 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
MCM4-208ENST00000519470 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 DNAJB1P25685 340 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 KLRC1P26715 233 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 PFKFB3Q16875 520 aaPredicted RBP13.38□□□□□ -0.27
MCM4-208ENST00000519470 ZNF484Q5JVG2 852 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 MCTP2Q6DN12 878 aa13.38□□□□□ -0.27
MCM4-208ENST00000519470 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms