RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 FRMD5Q7Z6J6 570 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 METTL13Q8N6R0 699 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 ACTRT1Q8TDG2 376 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 REEP2Q9BRK0 252 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 ANO3Q9BYT9 981 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 H0YGN5 161 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 MDH1P40925 334 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 PPARDQ03181 441 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 KNOP1Q1ED39 458 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 DCAF17Q5H9S7 520 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 C10orf76Q5T2E6 689 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 EPM2AIP1Q7L775 607 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 C1orf131Q8NDD1 294 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 TPCN2Q8NHX9 752 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 CERKQ8TCT0 537 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 PBKQ96KB5 322 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 DDX47Q9H0S4 455 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 TMBIM4Q9HC24 238 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 SIX2Q9NPC8 291 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 NENFQ9UMX5 172 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 NFS1Q9Y697 457 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 LY75O60449 1722 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 HMGB1P1B2RPK0 211 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 BHMG1C9JSJ3 638 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 SART1O43290 800 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 SPATA31C1P0DKV0 1188 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 CASP4P49662 377 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 EPHA7Q15375 998 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 GJB7Q6PEY0 223 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 B4GALNT4Q76KP1 1039 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 ETNPPLQ8TBG4 499 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 MBOAT7Q96N66 472 aa18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
PCDHGA11-202ENST00000518882 CYP3A7-CYP3A51PA0A087WV96 503 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 RSPH10B2B2RC85 870 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 C6orf229H3BNL8 230 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 RSPH10BP0C881 870 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 ITGA4P13612 1032 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 CYP3A7P24462 503 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 FLT3P36888 993 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 C10orf71Q711Q0 1435 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 ZNF473Q8WTR7 871 aaKnown RBP18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 MXD3Q9BW11 206 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 PCDHA1Q9Y5I3 950 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 BZW2Q9Y6E2 419 aaKnown RBP18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 ASTN1O14525 1302 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 MEIS2O14770 477 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 RAD21O60216 631 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 XRCC5P13010 732 aaKnown RBP18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 PRKCIP41743 596 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 KCNA1Q09470 495 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 PRR16Q569H4 304 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 KCNV1Q6PIU1 500 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 MMS22LQ6ZRQ5 1243 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 CRYGNQ8WXF5 182 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 NAP1L4Q99733 375 aaKnown RBP18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 CENPHQ9H3R5 247 aa18.1■□□□□ 0.49
PCDHGA11-202ENST00000518882 ATXN2Q99700 1313 aaKnown RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 PGRMC1O00264 195 aaKnown RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 RIMBP2O15034 1052 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 JAM2P57087 298 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 HDLBPQ00341 1268 aaKnown RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 CUL1Q13616 776 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 TCERG1LQ5VWI1 586 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 SYT2Q8N9I0 419 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 MYCBPAPQ8TBZ2 947 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 CCT8L2Q96SF2 557 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 IKZF4Q9H2S9 585 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 TMCO5BA8MYB1 307 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 MEFVO15553 781 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 GTF2A1P52655 376 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 NLRP14Q86W24 1093 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 SLFN12Q8IYM2 578 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 EIF1ADQ8N9N8 165 aaKnown RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■■■■ 61.7
PCDHGA11-202ENST00000518882 SLC35C1Q96A29 364 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 CALR3Q96L12 384 aaKnown RBP18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 USP40Q9NVE5 1235 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 STXBP5LQ9Y2K9 1186 aa18.09■□□□□ 0.49
PCDHGA11-202ENST00000518882 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 FNTAP49354 379 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 SCNN1DP51172 638 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 ARHGAP4P98171 946 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 ZNF844Q08AG5 666 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 IFI16Q16666 785 aaKnown RBP18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 SLFN11Q7Z7L1 901 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 SUGP1Q8IWZ8 645 aaKnown RBP18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 OLIG1Q8TAK6 271 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 LENG9Q96B70 501 aa18.08■□□□□ 0.48
PCDHGA11-202ENST00000518882 RBM17Q96I25 401 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms