RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 APPP05067 770 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 CYP11A1P05108 521 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 ARAFP10398 606 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NME1P15531 152 aaKnown RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 ADH6P28332 368 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 RPS8P62241 208 aaKnown RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NCAPHQ15003 741 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 TNIP1Q15025 636 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 ZYXQ15942 572 aaKnown RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 AKNAD1Q5T1N1 836 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 CST9Q5W186 159 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 TTLL5Q6EMB2 1281 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 OVOS1Q6IE37 1185 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 VHLLQ6RSH7 139 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 SYNE3Q6ZMZ3 975 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 UNC5AQ6ZN44 842 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 MFSD6Q6ZSS7 791 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 SV2AQ7L0J3 742 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 SP8Q8IXZ3 490 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 ZSWIM2Q8NEG5 633 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 ATG4CQ96DT6 458 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 GLIS2Q9BZE0 524 aaPredicted RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NRSN2Q9GZP1 204 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 IRF2BPLQ9H1B7 796 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NUP62CLQ9H1M0 184 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 LRP2BPQ9P2M1 347 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NSFL1CQ9UNZ2 370 aaKnown RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 CASP8AP2Q9UKL3 1982 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 BAZ2AQ9UIF9 1905 aaKnown RBP9.42□□□□□ -0.9
SFXN1-211ENST00000515736 MYH2Q9UKX2 1941 aa9.42□□□□□ -0.9
SFXN1-211ENST00000515736 NAV1Q8NEY1 1877 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 YEATS4O95619 227 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 METAP2P50579 478 aaKnown RBP eCLIP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 ANTXR2P58335 489 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 KIAA2012Q0VF49 1180 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 GRAPQ13588 217 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 SPTY2D1Q68D10 685 aaPredicted RBP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 C15orf52Q6ZUT6 534 aaKnown RBP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 HDXQ7Z353 690 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 FBXO18Q8NFZ0 1043 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 WNT8BQ93098 351 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 RTFDC1Q9BY42 306 aaPredicted RBP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 CCDC86Q9H6F5 360 aaKnown RBP9.41□□□□□ -0.9
SFXN1-211ENST00000515736 CCDC39Q9UFE4 941 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
SFXN1-211ENST00000515736 A0A1W2PQ27 194 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 A0A1W2PQ64 194 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 A0A1W2PQD8 194 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 ERICH2A1L162 156 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 GSG1L2A8MUP6 293 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 H7C1D1 291 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 TNFRSF10CO14798 259 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 ZBTB43O43298 467 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 DNAJA2O60884 412 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
SFXN1-211ENST00000515736 TPM3P06753 285 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 FAM153BP0C7A2 387 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 PLCG1P19174 1290 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 CDC25BP30305 580 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 MAP2K2P36507 400 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 TDO2P48775 406 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 ARL4DP49703 201 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 HAND2P61296 217 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 C19orf57Q0VDD7 668 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 COL9A3Q14050 684 aaPredicted RBP9.4□□□□□ -0.9
SFXN1-211ENST00000515736 POU4F3Q15319 338 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 GRIK5Q16478 980 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 TMEM201Q5SNT2 666 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 CDCP2Q5VXM1 449 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 APOA5Q6Q788 366 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 NLRC3Q7RTR2 1065 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 FERMT3Q86UX7 667 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 TBC1D10CQ8IV04 446 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 NANOS1Q8WY41 292 aaKnown RBP9.4□□□□□ -0.9
SFXN1-211ENST00000515736 FUCA2Q9BTY2 467 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 SPATA9Q9BWV2 254 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 LRRC2Q9BYS8 371 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 CLSTN2Q9H4D0 955 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 RTEL1Q9NZ71 1219 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
SFXN1-211ENST00000515736 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 SLC4A4Q9Y6R1 1079 aa9.4□□□□□ -0.9
SFXN1-211ENST00000515736 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.91
SFXN1-211ENST00000515736 COL4A1P02462 1669 aa9.39□□□□□ -0.91
SFXN1-211ENST00000515736 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
SFXN1-211ENST00000515736 RGS9O75916 674 aaPredicted RBP9.39□□□□□ -0.91
SFXN1-211ENST00000515736 SLC3A2P08195 630 aaKnown RBP9.39□□□□□ -0.91
SFXN1-211ENST00000515736 CALM1P0DP23 149 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms