RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TRAPPC12Q8WVT3 735 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 BRF1Q92994 677 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 C1QTNF1Q9BXJ1 281 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 FTHL17Q9BXU8 183 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 IGSF9BQ9UPX0 1349 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 FAM86B1E9PN63 330 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 BACH1O14867 736 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 CCNE2O96020 404 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 RB1P06400 928 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 CYP3A4P08684 503 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 FAM86B2P0C5J1 330 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 LINC00271P0C7V0 271 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 TMEM62Q0P6H9 643 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 FAM160B1Q5W0V3 765 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 PLA2G4DQ86XP0 818 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 REXO1Q8N1G1 1221 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 CRYGNQ8WXF5 182 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 LINC01599Q8WXQ3 324 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 CLP1Q92989 425 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 C11orf84Q9BUA3 381 aaPredicted RBP16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 C6orf50Q9HD87 102 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 SNX14Q9Y5W7 946 aa16.73■□□□□ 0.27
CCHCR1-229ENST00000512418 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 IGLV3-22A0A075B6J6 115 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 IPO5O00410 1097 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 HBP1O60381 514 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 DGKIO75912 1065 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 GNA11P29992 359 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 BMPR1AP36894 532 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 PAK2Q13177 524 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 BTG3Q14201 252 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 CCDC60Q8IWA6 550 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 NME8Q8N427 588 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 ATP8B4Q8TF62 1192 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 ZNF689Q96CS4 500 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 COL1A2P08123 1366 aa16.72■□□□□ 0.27
CCHCR1-229ENST00000512418 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 KLRC1P26715 233 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 KRT76Q01546 638 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 PKN1Q16512 942 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 TCEAL5Q5H9L2 206 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 MIS18BP1Q6P0N0 1132 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 NEK9Q8TD19 979 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 LMAN2LQ9H0V9 348 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 ZNF302Q9NR11 478 aa16.71■□□□□ 0.27
CCHCR1-229ENST00000512418 REC8O95072 547 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PSMA5P28066 241 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 AKAP17AQ02040 695 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 COL19A1Q14993 1142 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PUS10Q3MIT2 529 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PTCRAQ6ISU1 281 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 ZNF746Q6NUN9 644 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PDXDC2PQ6P474 469 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 FAM43BQ6ZT52 329 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 NPAS4Q8IUM7 802 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 CRIPAKQ8N1N5 446 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 BICD2Q8TD16 824 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PABPC5Q96DU9 382 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 TCEAL9Q9UHQ7 104 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
CCHCR1-229ENST00000512418 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 SWSAP1Q6NVH7 229 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 RTN4RL1Q86UN2 441 aaPredicted RBP16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 PHKBQ93100 1093 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
CCHCR1-229ENST00000512418 ATG2AQ2TAZ0 1938 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 ADAMTS3O15072 1205 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 GRM6O15303 877 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 NCK2O43639 380 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 IL9P15248 144 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 IFNAR1P17181 557 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 CIITAP33076 1130 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 NTRK3Q16288 839 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 PRR16Q569H4 304 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 KIAA0319LQ8IZA0 1049 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms